Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm27785-201ENSMUST00000184268 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm27466-201ENSMUST00000184396 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Gm27703-201ENSMUST00000184836 110 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Smarcc2Q6PDG5 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Mir449b-201ENSMUST00000104833 80 ntBASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Gm25925-201ENSMUST00000158314 306 ntBASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Gm25948-201ENSMUST00000175334 112 ntBASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Gm10253-201ENSMUST00000194270 940 ntBASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.73■□□□□ 0.27
Smarcc2Q6PDG5 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc2Q6PDG5 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcc2Q6PDG5 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smarcc2Q6PDG5 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smarcc2Q6PDG5 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcc2Q6PDG5 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms