Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf8Q6DID3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf8Q6DID3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf8Q6DID3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf8Q6DID3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf8Q6DID3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.67■□□□□ 0.26
Scaf8Q6DID3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf8Q6DID3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf8Q6DID3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf8Q6DID3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf8Q6DID3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf8Q6DID3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Gm7584-201ENSMUST00000175829 940 ntBASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Gm27516-201ENSMUST00000184237 98 ntBASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf8Q6DID3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Gm15240-201ENSMUST00000118156 720 ntBASIC16.65■□□□□ 0.26
Scaf8Q6DID3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Mir3547-201ENSMUST00000175461 88 ntBASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Gm4804-201ENSMUST00000182234 999 ntBASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Gm19078-201ENSMUST00000206311 727 ntBASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf8Q6DID3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Scaf8Q6DID3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Scaf8Q6DID3 Sybu-209ENSMUST00000228639 4113 ntBASIC16.64■□□□□ 0.26
Scaf8Q6DID3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Scaf8Q6DID3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Scaf8Q6DID3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
Scaf8Q6DID3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms