Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Notch3Q61982 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Gm16215-201ENSMUST00000161990 637 ntBASIC11.05□□□□□ -0.64
Notch3Q61982 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.05□□□□□ -0.64
Notch3Q61982 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Notch3Q61982 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Notch3Q61982 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Notch3Q61982 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Notch3Q61982 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Notch3Q61982 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Notch3Q61982 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Notch3Q61982 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Notch3Q61982 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Notch3Q61982 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Notch3Q61982 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Notch3Q61982 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Notch3Q61982 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Notch3Q61982 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Notch3Q61982 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.04□□□□□ -0.64
Notch3Q61982 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.04□□□□□ -0.64
Notch3Q61982 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.04□□□□□ -0.64
Notch3Q61982 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Notch3Q61982 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.04□□□□□ -0.64
Notch3Q61982 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.04□□□□□ -0.64
Notch3Q61982 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Syt7-204ENSMUST00000223586 1344 ntBASIC11.04□□□□□ -0.64
Notch3Q61982 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Gm22189-201ENSMUST00000103822 86 ntBASIC11.04□□□□□ -0.64
Notch3Q61982 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.04□□□□□ -0.64
Notch3Q61982 Gm15653-201ENSMUST00000119247 907 ntBASIC11.04□□□□□ -0.64
Notch3Q61982 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.04□□□□□ -0.64
Notch3Q61982 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.04□□□□□ -0.64
Notch3Q61982 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.04□□□□□ -0.64
Notch3Q61982 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.04□□□□□ -0.64
Notch3Q61982 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Notch3Q61982 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Notch3Q61982 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Notch3Q61982 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Notch3Q61982 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Notch3Q61982 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Notch3Q61982 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Notch3Q61982 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.03□□□□□ -0.64
Notch3Q61982 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Notch3Q61982 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.03□□□□□ -0.64
Notch3Q61982 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.03□□□□□ -0.64
Notch3Q61982 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.03□□□□□ -0.64
Notch3Q61982 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Notch3Q61982 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Notch3Q61982 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Notch3Q61982 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Notch3Q61982 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms