Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm28925-201ENSMUST00000188586 168 ntBASIC10.63□□□□□ -0.71
Foxc1Q61572 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC10.63□□□□□ -0.71
Foxc1Q61572 Gm43316-201ENSMUST00000197252 1295 ntBASIC10.63□□□□□ -0.71
Foxc1Q61572 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC10.63□□□□□ -0.71
Foxc1Q61572 Gm43553-201ENSMUST00000200900 685 ntBASIC10.63□□□□□ -0.71
Foxc1Q61572 Gm44872-201ENSMUST00000207864 420 ntBASIC10.63□□□□□ -0.71
Foxc1Q61572 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Foxc1Q61572 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.63□□□□□ -0.71
Foxc1Q61572 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Foxc1Q61572 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Foxc1Q61572 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Foxc1Q61572 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC10.63□□□□□ -0.71
Foxc1Q61572 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.63□□□□□ -0.71
Foxc1Q61572 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC10.63□□□□□ -0.71
Foxc1Q61572 Gm8096-201ENSMUST00000209921 1591 ntBASIC10.63□□□□□ -0.71
Foxc1Q61572 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Foxc1Q61572 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Foxc1Q61572 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Foxc1Q61572 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Foxc1Q61572 Tfap2a-203ENSMUST00000223869 2037 ntBASIC10.63□□□□□ -0.71
Foxc1Q61572 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Foxc1Q61572 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Foxc1Q61572 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Foxc1Q61572 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Foxc1Q61572 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Foxc1Q61572 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Foxc1Q61572 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.62□□□□□ -0.71
Foxc1Q61572 Gm8872-201ENSMUST00000197475 1341 ntBASIC10.62□□□□□ -0.71
Foxc1Q61572 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Foxc1Q61572 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC10.62□□□□□ -0.71
Foxc1Q61572 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Foxc1Q61572 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.62□□□□□ -0.71
Foxc1Q61572 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.62□□□□□ -0.71
Foxc1Q61572 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC10.62□□□□□ -0.71
Foxc1Q61572 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Foxc1Q61572 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Foxc1Q61572 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.62□□□□□ -0.71
Foxc1Q61572 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC10.62□□□□□ -0.71
Foxc1Q61572 Gm30437-201ENSMUST00000206086 1201 ntBASIC10.62□□□□□ -0.71
Foxc1Q61572 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC10.62□□□□□ -0.71
Foxc1Q61572 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Foxc1Q61572 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.62□□□□□ -0.71
Foxc1Q61572 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC10.62□□□□□ -0.71
Foxc1Q61572 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Foxc1Q61572 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Foxc1Q61572 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Foxc1Q61572 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Foxc1Q61572 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Foxc1Q61572 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Foxc1Q61572 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC10.61□□□□□ -0.71
Foxc1Q61572 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms