Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Six4Q61321 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Six4Q61321 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.46□□□□□ -0.1
Six4Q61321 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.45□□□□□ -0.1
Six4Q61321 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.45□□□□□ -0.1
Six4Q61321 Gm13223-201ENSMUST00000118609 747 ntBASIC14.45□□□□□ -0.1
Six4Q61321 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.45□□□□□ -0.1
Six4Q61321 Mir6956-201ENSMUST00000183598 62 ntBASIC14.45□□□□□ -0.1
Six4Q61321 Gm27430-201ENSMUST00000184585 107 ntBASIC14.45□□□□□ -0.1
Six4Q61321 Gm44333-201ENSMUST00000197168 107 ntBASIC14.45□□□□□ -0.1
Six4Q61321 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.45□□□□□ -0.1
Six4Q61321 Shd-206ENSMUST00000225145 998 ntBASIC14.45□□□□□ -0.1
Six4Q61321 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six4Q61321 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six4Q61321 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six4Q61321 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six4Q61321 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six4Q61321 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six4Q61321 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six4Q61321 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six4Q61321 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Six4Q61321 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Six4Q61321 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.44□□□□□ -0.1
Six4Q61321 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six4Q61321 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.44□□□□□ -0.1
Six4Q61321 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Six4Q61321 AA619741-201ENSMUST00000195095 646 ntBASIC14.44□□□□□ -0.1
Six4Q61321 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.44□□□□□ -0.1
Six4Q61321 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.44□□□□□ -0.1
Six4Q61321 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Six4Q61321 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Six4Q61321 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.44□□□□□ -0.1
Six4Q61321 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six4Q61321 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six4Q61321 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six4Q61321 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.44□□□□□ -0.1
Six4Q61321 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Six4Q61321 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Six4Q61321 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six4Q61321 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Six4Q61321 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Six4Q61321 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six4Q61321 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.44□□□□□ -0.1
Six4Q61321 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Six4Q61321 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.43□□□□□ -0.1
Six4Q61321 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.43□□□□□ -0.1
Six4Q61321 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Six4Q61321 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.43□□□□□ -0.1
Six4Q61321 Gm15957-201ENSMUST00000118893 974 ntBASIC14.43□□□□□ -0.1
Six4Q61321 Mir1897-201ENSMUST00000122581 272 ntBASIC14.43□□□□□ -0.1
Six4Q61321 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.43□□□□□ -0.1
Six4Q61321 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Six4Q61321 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.43□□□□□ -0.1
Six4Q61321 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Six4Q61321 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.43□□□□□ -0.1
Six4Q61321 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Six4Q61321 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.43□□□□□ -0.1
Six4Q61321 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Six4Q61321 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six4Q61321 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms