Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a1Q61245 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Col11a1Q61245 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Col11a1Q61245 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.74■□□□□ 0.11
Col11a1Q61245 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.74■□□□□ 0.11
Col11a1Q61245 Gm25927-201ENSMUST00000175058 117 ntBASIC15.74■□□□□ 0.11
Col11a1Q61245 Gm2383-201ENSMUST00000181461 807 ntBASIC15.74■□□□□ 0.11
Col11a1Q61245 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a1Q61245 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.74■□□□□ 0.11
Col11a1Q61245 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.74■□□□□ 0.11
Col11a1Q61245 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a1Q61245 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a1Q61245 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a1Q61245 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a1Q61245 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.74■□□□□ 0.11
Col11a1Q61245 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a1Q61245 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.74■□□□□ 0.11
Col11a1Q61245 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a1Q61245 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a1Q61245 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a1Q61245 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a1Q61245 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a1Q61245 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a1Q61245 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a1Q61245 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Col11a1Q61245 Gm5687-201ENSMUST00000118252 640 ntBASIC15.73■□□□□ 0.11
Col11a1Q61245 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.73■□□□□ 0.11
Col11a1Q61245 Gm38158-201ENSMUST00000194617 339 ntBASIC15.73■□□□□ 0.11
Col11a1Q61245 Gm37922-201ENSMUST00000195596 455 ntBASIC15.73■□□□□ 0.11
Col11a1Q61245 Gm37497-201ENSMUST00000195830 798 ntBASIC15.73■□□□□ 0.11
Col11a1Q61245 Gm5161-201ENSMUST00000075243 853 ntBASIC15.73■□□□□ 0.11
Col11a1Q61245 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC15.73■□□□□ 0.11
Col11a1Q61245 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a1Q61245 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a1Q61245 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.73■□□□□ 0.11
Col11a1Q61245 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a1Q61245 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a1Q61245 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a1Q61245 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Col11a1Q61245 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.73■□□□□ 0.11
Col11a1Q61245 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a1Q61245 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Col11a1Q61245 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Col11a1Q61245 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Col11a1Q61245 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Col11a1Q61245 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Col11a1Q61245 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Col11a1Q61245 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a1Q61245 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.73■□□□□ 0.11
Col11a1Q61245 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a1Q61245 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a1Q61245 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a1Q61245 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a1Q61245 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.72■□□□□ 0.11
Col11a1Q61245 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.72■□□□□ 0.11
Col11a1Q61245 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.72■□□□□ 0.11
Col11a1Q61245 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a1Q61245 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a1Q61245 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a1Q61245 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Col11a1Q61245 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a1Q61245 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a1Q61245 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a1Q61245 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a1Q61245 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a1Q61245 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.72■□□□□ 0.11
Col11a1Q61245 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.72■□□□□ 0.11
Col11a1Q61245 Gm9368-201ENSMUST00000219348 831 ntBASIC15.72■□□□□ 0.11
Col11a1Q61245 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.72■□□□□ 0.11
Col11a1Q61245 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Col11a1Q61245 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Col11a1Q61245 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Col11a1Q61245 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a1Q61245 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a1Q61245 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.72■□□□□ 0.11
Col11a1Q61245 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Col11a1Q61245 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a1Q61245 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a1Q61245 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a1Q61245 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a1Q61245 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a1Q61245 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.71■□□□□ 0.11
Col11a1Q61245 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a1Q61245 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.71■□□□□ 0.11
Col11a1Q61245 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.71■□□□□ 0.11
Col11a1Q61245 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.71■□□□□ 0.11
Col11a1Q61245 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.71■□□□□ 0.11
Col11a1Q61245 Gm12403-201ENSMUST00000121384 959 ntBASIC15.71■□□□□ 0.11
Col11a1Q61245 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.71■□□□□ 0.11
Col11a1Q61245 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a1Q61245 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.71■□□□□ 0.11
Col11a1Q61245 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.71■□□□□ 0.11
Col11a1Q61245 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.71■□□□□ 0.11
Col11a1Q61245 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.71■□□□□ 0.11
Col11a1Q61245 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.71■□□□□ 0.11
Col11a1Q61245 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.71■□□□□ 0.11
Col11a1Q61245 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a1Q61245 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a1Q61245 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a1Q61245 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms