Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col12a1Q60847 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col12a1Q60847 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.87□□□□□ -0.19
Col12a1Q60847 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.87□□□□□ -0.19
Col12a1Q60847 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col12a1Q60847 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.87□□□□□ -0.19
Col12a1Q60847 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.87□□□□□ -0.19
Col12a1Q60847 Gm8566-201ENSMUST00000120174 465 ntBASIC13.87□□□□□ -0.19
Col12a1Q60847 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.87□□□□□ -0.19
Col12a1Q60847 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.87□□□□□ -0.19
Col12a1Q60847 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col12a1Q60847 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col12a1Q60847 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.87□□□□□ -0.19
Col12a1Q60847 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col12a1Q60847 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.87□□□□□ -0.19
Col12a1Q60847 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col12a1Q60847 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Col12a1Q60847 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.86□□□□□ -0.19
Col12a1Q60847 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col12a1Q60847 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.86□□□□□ -0.19
Col12a1Q60847 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col12a1Q60847 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col12a1Q60847 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col12a1Q60847 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col12a1Q60847 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col12a1Q60847 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col12a1Q60847 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col12a1Q60847 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Col12a1Q60847 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Col12a1Q60847 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col12a1Q60847 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col12a1Q60847 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col12a1Q60847 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col12a1Q60847 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Col12a1Q60847 Gm6222-202ENSMUST00000182143 629 ntBASIC13.86□□□□□ -0.19
Col12a1Q60847 Gm10608-202ENSMUST00000213924 676 ntBASIC13.86□□□□□ -0.19
Col12a1Q60847 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.86□□□□□ -0.19
Col12a1Q60847 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col12a1Q60847 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col12a1Q60847 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col12a1Q60847 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col12a1Q60847 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.86□□□□□ -0.19
Col12a1Q60847 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col12a1Q60847 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col12a1Q60847 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Col12a1Q60847 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Col12a1Q60847 Mir6927-201ENSMUST00000184494 71 ntBASIC13.86□□□□□ -0.19
Col12a1Q60847 Gm8959-201ENSMUST00000213150 571 ntBASIC13.86□□□□□ -0.19
Col12a1Q60847 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.86□□□□□ -0.19
Col12a1Q60847 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Col12a1Q60847 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col12a1Q60847 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col12a1Q60847 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col12a1Q60847 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col12a1Q60847 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col12a1Q60847 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col12a1Q60847 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col12a1Q60847 Gm15370-201ENSMUST00000117158 253 ntBASIC13.85□□□□□ -0.19
Col12a1Q60847 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.85□□□□□ -0.19
Col12a1Q60847 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.85□□□□□ -0.19
Col12a1Q60847 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col12a1Q60847 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Col12a1Q60847 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.85□□□□□ -0.19
Col12a1Q60847 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col12a1Q60847 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col12a1Q60847 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
Col12a1Q60847 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col12a1Q60847 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col12a1Q60847 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Col12a1Q60847 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.85□□□□□ -0.19
Col12a1Q60847 Gm8099-201ENSMUST00000200510 742 ntBASIC13.85□□□□□ -0.19
Col12a1Q60847 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col12a1Q60847 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col12a1Q60847 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col12a1Q60847 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col12a1Q60847 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col12a1Q60847 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col12a1Q60847 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col12a1Q60847 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.85□□□□□ -0.19
Col12a1Q60847 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.85□□□□□ -0.19
Col12a1Q60847 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.84□□□□□ -0.19
Col12a1Q60847 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Col12a1Q60847 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.84□□□□□ -0.19
Col12a1Q60847 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Col12a1Q60847 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Col12a1Q60847 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.84□□□□□ -0.19
Col12a1Q60847 Gm5687-201ENSMUST00000118252 640 ntBASIC13.84□□□□□ -0.19
Col12a1Q60847 Gm13385-201ENSMUST00000121089 220 ntBASIC13.84□□□□□ -0.19
Col12a1Q60847 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Gm25732-201ENSMUST00000175168 60 ntBASIC13.84□□□□□ -0.19
Col12a1Q60847 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms