Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Gm20553-201ENSMUST00000204205 844 ntBASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Gm11025-201ENSMUST00000140773 466 ntBASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Gm5264-201ENSMUST00000190584 848 ntBASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Gm10175-201ENSMUST00000086013 645 ntBASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav5d-4Q5R1F6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.43
Trav5d-4Q5R1F6 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav5d-4Q5R1F6 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Gm11543-201ENSMUST00000120758 370 ntBASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Gm8000-201ENSMUST00000188378 592 ntBASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms