Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Gm12859-201ENSMUST00000117834 427 ntBASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rc3h1Q4VGL6 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rc3h1Q4VGL6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rc3h1Q4VGL6 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rc3h1Q4VGL6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.52■□□□□ 0.24
Rc3h1Q4VGL6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rc3h1Q4VGL6 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.52■□□□□ 0.24
Rc3h1Q4VGL6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rc3h1Q4VGL6 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rc3h1Q4VGL6 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Rc3h1Q4VGL6 Gm10766-202ENSMUST00000194123 606 ntBASIC16.52■□□□□ 0.24
Rc3h1Q4VGL6 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.52■□□□□ 0.24
Rc3h1Q4VGL6 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rc3h1Q4VGL6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rc3h1Q4VGL6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rc3h1Q4VGL6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rc3h1Q4VGL6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rc3h1Q4VGL6 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.52■□□□□ 0.23
Rc3h1Q4VGL6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rc3h1Q4VGL6 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rc3h1Q4VGL6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rc3h1Q4VGL6 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rc3h1Q4VGL6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Rc3h1Q4VGL6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rc3h1Q4VGL6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rc3h1Q4VGL6 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rc3h1Q4VGL6 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms