Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm12033-201ENSMUST00000180654 1002 ntBASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Gm5559-201ENSMUST00000180755 1002 ntBASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Gm4335-201ENSMUST00000182581 1004 ntBASIC17.47■□□□□ 0.39
Shank3Q4ACU6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Gm7895-201ENSMUST00000187459 1173 ntBASIC17.46■□□□□ 0.39
Shank3Q4ACU6 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Gm5161-201ENSMUST00000075243 853 ntBASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shank3Q4ACU6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shank3Q4ACU6 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Shank3Q4ACU6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shank3Q4ACU6 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shank3Q4ACU6 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Shank3Q4ACU6 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Shank3Q4ACU6 Gm13342-201ENSMUST00000121055 207 ntBASIC17.45■□□□□ 0.38
Shank3Q4ACU6 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shank3Q4ACU6 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC17.45■□□□□ 0.38
Shank3Q4ACU6 Gm37008-201ENSMUST00000195712 319 ntBASIC17.45■□□□□ 0.38
Shank3Q4ACU6 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Shank3Q4ACU6 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC17.45■□□□□ 0.38
Shank3Q4ACU6 Gm12846-201ENSMUST00000120431 1373 ntBASIC17.45■□□□□ 0.38
Shank3Q4ACU6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.45■□□□□ 0.38
Shank3Q4ACU6 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC17.45■□□□□ 0.38
Shank3Q4ACU6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shank3Q4ACU6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shank3Q4ACU6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
Shank3Q4ACU6 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shank3Q4ACU6 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Gm43068-201ENSMUST00000201095 1273 ntBASIC17.44■□□□□ 0.38
Shank3Q4ACU6 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank3Q4ACU6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms