Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Gm1401-201ENSMUST00000122048 772 ntBASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Gm37153-201ENSMUST00000193637 231 ntBASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Gm6443-201ENSMUST00000203599 874 ntBASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Shisa3Q3UPR0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Gm8749-201ENSMUST00000117737 331 ntBASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Gm14716-201ENSMUST00000120138 718 ntBASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Gm9726-201ENSMUST00000180321 678 ntBASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Gm27628-201ENSMUST00000184911 107 ntBASIC12.37□□□□□ -0.43
Shisa3Q3UPR0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms