Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Q3U1D9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Q3U1D9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 Gm15321-201ENSMUST00000121290 288 ntBASIC12.44□□□□□ -0.42
Q3U1D9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.44□□□□□ -0.42
Q3U1D9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.44□□□□□ -0.42
Q3U1D9 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Q3U1D9 Gm33320-201ENSMUST00000192232 530 ntBASIC12.44□□□□□ -0.42
Q3U1D9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.44□□□□□ -0.42
Q3U1D9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.44□□□□□ -0.42
Q3U1D9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Q3U1D9 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.44□□□□□ -0.42
Q3U1D9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Q3U1D9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Q3U1D9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
Q3U1D9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Q3U1D9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.44□□□□□ -0.42
Q3U1D9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.44□□□□□ -0.42
Q3U1D9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q3U1D9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Q3U1D9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.43□□□□□ -0.42
Q3U1D9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Q3U1D9 Gm12882-201ENSMUST00000121696 517 ntBASIC12.43□□□□□ -0.42
Q3U1D9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.43□□□□□ -0.42
Q3U1D9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Q3U1D9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.43□□□□□ -0.42
Q3U1D9 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.43□□□□□ -0.42
Q3U1D9 Gm29667-201ENSMUST00000190817 490 ntBASIC12.43□□□□□ -0.42
Q3U1D9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.43□□□□□ -0.42
Q3U1D9 Gm6916-202ENSMUST00000205523 195 ntBASIC12.43□□□□□ -0.42
Q3U1D9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Q3U1D9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Q3U1D9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.42□□□□□ -0.42
Q3U1D9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 Gm15393-201ENSMUST00000120499 219 ntBASIC12.42□□□□□ -0.42
Q3U1D9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Q3U1D9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.42□□□□□ -0.42
Q3U1D9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Q3U1D9 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.42□□□□□ -0.42
Q3U1D9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Q3U1D9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Q3U1D9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms