Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pdlim7Q3TJD7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim7Q3TJD7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Pdlim7Q3TJD7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim7Q3TJD7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim7Q3TJD7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim7Q3TJD7 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pdlim7Q3TJD7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.97■□□□□ 0.15
Pdlim7Q3TJD7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Gm23931-201ENSMUST00000103842 109 ntBASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Gm15957-201ENSMUST00000118893 974 ntBASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim7Q3TJD7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
Pdlim7Q3TJD7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pdlim7Q3TJD7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Pdlim7Q3TJD7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pdlim7Q3TJD7 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pdlim7Q3TJD7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pdlim7Q3TJD7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Gm12882-201ENSMUST00000121696 517 ntBASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Gm19078-201ENSMUST00000206311 727 ntBASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim7Q3TJD7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim7Q3TJD7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms