Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.11□□□□□ -0.15
Q3KNL4 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.11□□□□□ -0.15
Q3KNL4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.11□□□□□ -0.15
Q3KNL4 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Gm16026-204ENSMUST00000162652 683 ntBASIC14.11□□□□□ -0.15
Q3KNL4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.11□□□□□ -0.15
Q3KNL4 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Q3KNL4 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.11□□□□□ -0.15
Q3KNL4 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Q3KNL4 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Q3KNL4 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Gm14042-201ENSMUST00000120139 833 ntBASIC14.1□□□□□ -0.15
Q3KNL4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.1□□□□□ -0.15
Q3KNL4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.1□□□□□ -0.15
Q3KNL4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Q3KNL4 Gm9182-201ENSMUST00000217829 639 ntBASIC14.1□□□□□ -0.15
Q3KNL4 Thap2-203ENSMUST00000218989 527 ntBASIC14.1□□□□□ -0.15
Q3KNL4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.1□□□□□ -0.15
Q3KNL4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Q3KNL4 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.1□□□□□ -0.15
Q3KNL4 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q3KNL4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Q3KNL4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Q3KNL4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Q3KNL4 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Gm16198-201ENSMUST00000118766 670 ntBASIC14.09□□□□□ -0.15
Q3KNL4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.09□□□□□ -0.15
Q3KNL4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Q3KNL4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.09□□□□□ -0.15
Q3KNL4 Olfr286-202ENSMUST00000205305 969 ntBASIC14.09□□□□□ -0.15
Q3KNL4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Q3KNL4 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.09□□□□□ -0.15
Q3KNL4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.09□□□□□ -0.15
Q3KNL4 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Q3KNL4 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Q3KNL4 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Q3KNL4 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms