Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Thap2-203ENSMUST00000218989 527 ntBASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nhej1Q3KNJ2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Mir5131-201ENSMUST00000175426 93 ntBASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.29■□□□□ 0.04
Nhej1Q3KNJ2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Gm5479-201ENSMUST00000160578 435 ntBASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Gm8584-201ENSMUST00000171982 758 ntBASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Gm18195-201ENSMUST00000207604 706 ntBASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.28■□□□□ 0.04
Nhej1Q3KNJ2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nhej1Q3KNJ2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nhej1Q3KNJ2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nhej1Q3KNJ2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nhej1Q3KNJ2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nhej1Q3KNJ2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nhej1Q3KNJ2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nhej1Q3KNJ2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Nhej1Q3KNJ2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Nhej1Q3KNJ2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Nhej1Q3KNJ2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Nhej1Q3KNJ2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nhej1Q3KNJ2 Gm5177-201ENSMUST00000183092 997 ntBASIC15.27■□□□□ 0.04
Nhej1Q3KNJ2 Gm27301-201ENSMUST00000184012 127 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms