Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Dhrs4-202ENSMUST00000226168 828 ntBASIC7.42□□□□□ -1.22
Ush2AQ2QI47 AC123665.1-201ENSMUST00000228204 438 ntBASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Mir680-2-201ENSMUST00000102163 110 ntBASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Gm23251-201ENSMUST00000103773 110 ntBASIC7.42□□□□□ -1.22
Ush2AQ2QI47 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Gm11980-201ENSMUST00000121445 986 ntBASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Gm42471-201ENSMUST00000201457 1865 ntBASIC7.41□□□□□ -1.22
Ush2AQ2QI47 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Gm42918-201ENSMUST00000199249 1580 ntBASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Gm13385-201ENSMUST00000121089 220 ntBASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Gm15957-201ENSMUST00000118893 974 ntBASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Gm12628-201ENSMUST00000122193 382 ntBASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Gm31256-201ENSMUST00000194705 506 ntBASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Gm5340-201ENSMUST00000203733 880 ntBASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ush2AQ2QI47 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms