Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col19a1Q0VF58 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col19a1Q0VF58 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col19a1Q0VF58 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col19a1Q0VF58 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Gm22902-201ENSMUST00000158488 302 ntBASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Gm44608-201ENSMUST00000206827 855 ntBASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col19a1Q0VF58 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Gm10156-201ENSMUST00000122364 462 ntBASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Gm6152-201ENSMUST00000151704 340 ntBASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Gm4271-201ENSMUST00000174444 973 ntBASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Gm10608-202ENSMUST00000213924 676 ntBASIC15.12■□□□□ 0.01
Col19a1Q0VF58 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col19a1Q0VF58 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Gm27320-201ENSMUST00000184892 109 ntBASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Gm29396-201ENSMUST00000185659 716 ntBASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Gm5363-201ENSMUST00000211927 938 ntBASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Gm6082-201ENSMUST00000215204 454 ntBASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col19a1Q0VF58 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col19a1Q0VF58 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col19a1Q0VF58 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col19a1Q0VF58 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col19a1Q0VF58 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col19a1Q0VF58 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col19a1Q0VF58 AC113441.2-201ENSMUST00000221538 1468 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms