Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Gm12350-201ENSMUST00000121208 462 ntBASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptchd3Q0EEE2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.85□□□□□ -0.19
Ptchd3Q0EEE2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Gm18246-201ENSMUST00000221023 728 ntBASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ptchd3Q0EEE2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ptchd3Q0EEE2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms