Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Gm11764-201ENSMUST00000120221 623 ntBASIC11.94□□□□□ -0.5
Tff1Q08423 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.94□□□□□ -0.5
Tff1Q08423 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.94□□□□□ -0.5
Tff1Q08423 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.94□□□□□ -0.5
Tff1Q08423 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.94□□□□□ -0.5
Tff1Q08423 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Tff1Q08423 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.94□□□□□ -0.5
Tff1Q08423 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Tff1Q08423 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.94□□□□□ -0.5
Tff1Q08423 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.93□□□□□ -0.5
Tff1Q08423 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Tff1Q08423 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Tff1Q08423 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Tff1Q08423 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.93□□□□□ -0.5
Tff1Q08423 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.93□□□□□ -0.5
Tff1Q08423 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Tff1Q08423 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.93□□□□□ -0.5
Tff1Q08423 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.93□□□□□ -0.5
Tff1Q08423 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Tff1Q08423 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Mir6956-201ENSMUST00000183598 62 ntBASIC11.93□□□□□ -0.5
Tff1Q08423 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.93□□□□□ -0.5
Tff1Q08423 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Tff1Q08423 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.93□□□□□ -0.5
Tff1Q08423 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Tff1Q08423 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.93□□□□□ -0.5
Tff1Q08423 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tff1Q08423 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Tff1Q08423 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Tff1Q08423 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tff1Q08423 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tff1Q08423 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tff1Q08423 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Tff1Q08423 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Tff1Q08423 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tff1Q08423 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.92□□□□□ -0.5
Tff1Q08423 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Tff1Q08423 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.92□□□□□ -0.5
Tff1Q08423 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tff1Q08423 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tff1Q08423 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms