Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ebf1Q07802 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ebf1Q07802 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf1Q07802 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf1Q07802 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf1Q07802 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf1Q07802 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.53□□□□□ -0.08
Ebf1Q07802 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf1Q07802 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf1Q07802 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf1Q07802 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf1Q07802 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf1Q07802 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ebf1Q07802 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf1Q07802 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Ebf1Q07802 Gm43703-201ENSMUST00000200523 763 ntBASIC14.53□□□□□ -0.08
Ebf1Q07802 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.53□□□□□ -0.08
Ebf1Q07802 Gm20445-201ENSMUST00000061905 565 ntBASIC14.53□□□□□ -0.08
Ebf1Q07802 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ebf1Q07802 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf1Q07802 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Ebf1Q07802 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf1Q07802 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf1Q07802 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf1Q07802 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf1Q07802 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ebf1Q07802 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf1Q07802 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf1Q07802 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf1Q07802 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf1Q07802 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ebf1Q07802 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ebf1Q07802 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ebf1Q07802 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ebf1Q07802 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.52□□□□□ -0.08
Ebf1Q07802 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ebf1Q07802 Gm22189-201ENSMUST00000103822 86 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf1Q07802 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf1Q07802 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ebf1Q07802 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm29310-201ENSMUST00000185468 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm21825-201ENSMUST00000185728 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm29109-201ENSMUST00000185895 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm21896-201ENSMUST00000186520 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm21873-201ENSMUST00000186728 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm21794-201ENSMUST00000187056 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm21880-201ENSMUST00000187275 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm21826-201ENSMUST00000187451 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm21198-201ENSMUST00000188393 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm21749-201ENSMUST00000189343 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm21901-201ENSMUST00000189568 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm29424-201ENSMUST00000189716 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm28599-201ENSMUST00000189838 694 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm21867-201ENSMUST00000189917 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm29269-201ENSMUST00000190087 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm21722-201ENSMUST00000190153 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm28423-201ENSMUST00000190701 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm21899-201ENSMUST00000190745 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm21910-201ENSMUST00000191163 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm21849-201ENSMUST00000191571 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm28678-201ENSMUST00000191593 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm20910-201ENSMUST00000193268 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm21871-201ENSMUST00000194621 696 ntBASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.52□□□□□ -0.09
Ebf1Q07802 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.52□□□□□ -0.09
Ebf1Q07802 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf1Q07802 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf1Q07802 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf1Q07802 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.52□□□□□ -0.09
Ebf1Q07802 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf1Q07802 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf1Q07802 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.52□□□□□ -0.09
Ebf1Q07802 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf1Q07802 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf1Q07802 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf1Q07802 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf1Q07802 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf1Q07802 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ebf1Q07802 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.52□□□□□ -0.09
Ebf1Q07802 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf1Q07802 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf1Q07802 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf1Q07802 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf1Q07802 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ebf1Q07802 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf1Q07802 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf1Q07802 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.51□□□□□ -0.09
Ebf1Q07802 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf1Q07802 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf1Q07802 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms