Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sox4Q06831 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.1□□□□□ -0.15
Sox4Q06831 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox4Q06831 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox4Q06831 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox4Q06831 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox4Q06831 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox4Q06831 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox4Q06831 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox4Q06831 Gm25144-201ENSMUST00000179561 110 ntBASIC14.1□□□□□ -0.15
Sox4Q06831 Gm25352-201ENSMUST00000179815 110 ntBASIC14.1□□□□□ -0.15
Sox4Q06831 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox4Q06831 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.1□□□□□ -0.15
Sox4Q06831 Dupd1-202ENSMUST00000224735 548 ntBASIC14.1□□□□□ -0.15
Sox4Q06831 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox4Q06831 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox4Q06831 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox4Q06831 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox4Q06831 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sox4Q06831 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sox4Q06831 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sox4Q06831 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox4Q06831 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox4Q06831 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox4Q06831 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox4Q06831 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox4Q06831 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox4Q06831 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sox4Q06831 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 Mir1897-201ENSMUST00000122581 272 ntBASIC14.09□□□□□ -0.15
Sox4Q06831 Auts2-212ENSMUST00000178555 309 ntBASIC14.09□□□□□ -0.15
Sox4Q06831 Gm10576-201ENSMUST00000191927 825 ntBASIC14.09□□□□□ -0.15
Sox4Q06831 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.09□□□□□ -0.15
Sox4Q06831 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.09□□□□□ -0.15
Sox4Q06831 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.09□□□□□ -0.15
Sox4Q06831 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Sox4Q06831 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox4Q06831 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Sox4Q06831 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox4Q06831 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox4Q06831 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox4Q06831 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox4Q06831 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Sox4Q06831 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Sox4Q06831 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.08□□□□□ -0.16
Sox4Q06831 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.08□□□□□ -0.16
Sox4Q06831 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox4Q06831 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox4Q06831 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.08□□□□□ -0.16
Sox4Q06831 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox4Q06831 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox4Q06831 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Sox4Q06831 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.08□□□□□ -0.16
Sox4Q06831 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.08□□□□□ -0.16
Sox4Q06831 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Sox4Q06831 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox4Q06831 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox4Q06831 Shd-206ENSMUST00000225145 998 ntBASIC14.08□□□□□ -0.16
Sox4Q06831 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.08□□□□□ -0.16
Sox4Q06831 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox4Q06831 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox4Q06831 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.08□□□□□ -0.16
Sox4Q06831 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Sox4Q06831 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox4Q06831 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Sox4Q06831 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.08□□□□□ -0.16
Sox4Q06831 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox4Q06831 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox4Q06831 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms