Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.05□□□□□ -0.48
Npas1P97459 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npas1P97459 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Npas1P97459 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.05□□□□□ -0.48
Npas1P97459 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Npas1P97459 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.05□□□□□ -0.48
Npas1P97459 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.05□□□□□ -0.48
Npas1P97459 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npas1P97459 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Npas1P97459 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Npas1P97459 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npas1P97459 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.05□□□□□ -0.48
Npas1P97459 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Npas1P97459 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npas1P97459 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npas1P97459 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Npas1P97459 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Npas1P97459 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npas1P97459 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Npas1P97459 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npas1P97459 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Npas1P97459 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Npas1P97459 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.04□□□□□ -0.48
Npas1P97459 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.04□□□□□ -0.48
Npas1P97459 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Gm8655-201ENSMUST00000221159 852 ntBASIC12.04□□□□□ -0.48
Npas1P97459 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.04□□□□□ -0.48
Npas1P97459 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Npas1P97459 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.04□□□□□ -0.48
Npas1P97459 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.04□□□□□ -0.48
Npas1P97459 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.04□□□□□ -0.48
Npas1P97459 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Npas1P97459 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npas1P97459 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npas1P97459 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npas1P97459 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npas1P97459 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npas1P97459 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Npas1P97459 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npas1P97459 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.03□□□□□ -0.48
Npas1P97459 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Npas1P97459 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npas1P97459 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npas1P97459 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npas1P97459 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npas1P97459 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Npas1P97459 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.03□□□□□ -0.48
Npas1P97459 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npas1P97459 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npas1P97459 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Npas1P97459 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npas1P97459 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.03□□□□□ -0.48
Npas1P97459 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.03□□□□□ -0.48
Npas1P97459 Gm27646-201ENSMUST00000183989 110 ntBASIC12.03□□□□□ -0.48
Npas1P97459 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.03□□□□□ -0.48
Npas1P97459 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npas1P97459 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Npas1P97459 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npas1P97459 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npas1P97459 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npas1P97459 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.03□□□□□ -0.48
Npas1P97459 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npas1P97459 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Npas1P97459 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npas1P97459 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npas1P97459 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Npas1P97459 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Npas1P97459 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Npas1P97459 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Npas1P97459 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Npas1P97459 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Npas1P97459 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.02□□□□□ -0.48
Npas1P97459 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Npas1P97459 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Npas1P97459 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Npas1P97459 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Npas1P97459 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Npas1P97459 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms