Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cacna1aP97445 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cacna1aP97445 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cacna1aP97445 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cacna1aP97445 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.21□□□□□ -0.29
Cacna1aP97445 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cacna1aP97445 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cacna1aP97445 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cacna1aP97445 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cacna1aP97445 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cacna1aP97445 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cacna1aP97445 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.21□□□□□ -0.3
Cacna1aP97445 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.21□□□□□ -0.3
Cacna1aP97445 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
Cacna1aP97445 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Cacna1aP97445 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cacna1aP97445 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cacna1aP97445 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cacna1aP97445 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cacna1aP97445 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cacna1aP97445 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cacna1aP97445 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Cacna1aP97445 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cacna1aP97445 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.2□□□□□ -0.3
Cacna1aP97445 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
Cacna1aP97445 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.2□□□□□ -0.3
Cacna1aP97445 Gm12585-201ENSMUST00000117307 290 ntBASIC13.2□□□□□ -0.3
Cacna1aP97445 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Cacna1aP97445 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cacna1aP97445 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cacna1aP97445 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.2□□□□□ -0.3
Cacna1aP97445 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1aP97445 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.2□□□□□ -0.3
Cacna1aP97445 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cacna1aP97445 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.19□□□□□ -0.3
Cacna1aP97445 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cacna1aP97445 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Mir1894-201ENSMUST00000122802 81 ntBASIC13.19□□□□□ -0.3
Cacna1aP97445 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Mir7070-201ENSMUST00000183657 86 ntBASIC13.19□□□□□ -0.3
Cacna1aP97445 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.19□□□□□ -0.3
Cacna1aP97445 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.19□□□□□ -0.3
Cacna1aP97445 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.19□□□□□ -0.3
Cacna1aP97445 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.19□□□□□ -0.3
Cacna1aP97445 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.19□□□□□ -0.3
Cacna1aP97445 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cacna1aP97445 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1aP97445 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.18□□□□□ -0.3
Cacna1aP97445 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1aP97445 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.18□□□□□ -0.3
Cacna1aP97445 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.18□□□□□ -0.3
Cacna1aP97445 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.18□□□□□ -0.3
Cacna1aP97445 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.18□□□□□ -0.3
Cacna1aP97445 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1aP97445 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms