Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smad1P70340 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smad1P70340 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smad1P70340 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.8□□□□□ -0.04
Smad1P70340 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
Smad1P70340 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.8□□□□□ -0.04
Smad1P70340 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smad1P70340 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smad1P70340 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smad1P70340 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smad1P70340 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smad1P70340 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smad1P70340 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smad1P70340 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smad1P70340 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smad1P70340 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.79□□□□□ -0.04
Smad1P70340 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Smad1P70340 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smad1P70340 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smad1P70340 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smad1P70340 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Smad1P70340 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.79□□□□□ -0.04
Smad1P70340 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smad1P70340 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smad1P70340 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smad1P70340 Mir6990-201ENSMUST00000183724 91 ntBASIC14.79□□□□□ -0.04
Smad1P70340 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smad1P70340 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smad1P70340 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smad1P70340 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smad1P70340 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smad1P70340 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smad1P70340 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smad1P70340 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Smad1P70340 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Smad1P70340 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smad1P70340 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smad1P70340 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smad1P70340 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.79□□□□□ -0.04
Smad1P70340 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
Smad1P70340 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smad1P70340 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smad1P70340 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smad1P70340 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smad1P70340 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smad1P70340 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Smad1P70340 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Smad1P70340 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smad1P70340 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Smad1P70340 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Smad1P70340 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smad1P70340 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smad1P70340 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smad1P70340 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Smad1P70340 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.77□□□□□ -0.04
Smad1P70340 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smad1P70340 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smad1P70340 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smad1P70340 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smad1P70340 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smad1P70340 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Smad1P70340 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Smad1P70340 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smad1P70340 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Smad1P70340 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Smad1P70340 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smad1P70340 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Smad1P70340 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.77□□□□□ -0.05
Smad1P70340 Gm11745-201ENSMUST00000121669 448 ntBASIC14.77□□□□□ -0.05
Smad1P70340 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms