Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.66□□□□□ -0.06
Ybx1P62960 Gm12585-201ENSMUST00000117307 290 ntBASIC14.66□□□□□ -0.06
Ybx1P62960 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.66□□□□□ -0.06
Ybx1P62960 Gm10275-202ENSMUST00000168697 495 ntBASIC14.66□□□□□ -0.06
Ybx1P62960 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ybx1P62960 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.66□□□□□ -0.06
Ybx1P62960 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.66□□□□□ -0.06
Ybx1P62960 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.66□□□□□ -0.06
Ybx1P62960 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Ybx1P62960 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.66□□□□□ -0.06
Ybx1P62960 Gm10275-201ENSMUST00000092620 635 ntBASIC14.66□□□□□ -0.06
Ybx1P62960 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Ybx1P62960 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ybx1P62960 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.66□□□□□ -0.06
Ybx1P62960 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ybx1P62960 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ybx1P62960 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ybx1P62960 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ybx1P62960 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ybx1P62960 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ybx1P62960 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Ybx1P62960 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ybx1P62960 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ybx1P62960 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ybx1P62960 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ybx1P62960 Gm15393-201ENSMUST00000120499 219 ntBASIC14.65□□□□□ -0.06
Ybx1P62960 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ybx1P62960 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ybx1P62960 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Ybx1P62960 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ybx1P62960 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ybx1P62960 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ybx1P62960 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ybx1P62960 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ybx1P62960 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ybx1P62960 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ybx1P62960 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Ybx1P62960 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ybx1P62960 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ybx1P62960 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.65□□□□□ -0.06
Ybx1P62960 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ybx1P62960 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
Ybx1P62960 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ybx1P62960 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.64□□□□□ -0.07
Ybx1P62960 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ybx1P62960 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.64□□□□□ -0.07
Ybx1P62960 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
Ybx1P62960 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ybx1P62960 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.64□□□□□ -0.07
Ybx1P62960 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ybx1P62960 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.64□□□□□ -0.07
Ybx1P62960 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.64□□□□□ -0.07
Ybx1P62960 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.64□□□□□ -0.07
Ybx1P62960 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.64□□□□□ -0.07
Ybx1P62960 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.64□□□□□ -0.07
Ybx1P62960 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Ybx1P62960 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Ybx1P62960 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
Ybx1P62960 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.64□□□□□ -0.07
Ybx1P62960 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ybx1P62960 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.63□□□□□ -0.07
Ybx1P62960 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.63□□□□□ -0.07
Ybx1P62960 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms