Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Ube2d3P61079 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Ube2d3P61079 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Gm38577-201ENSMUST00000221531 4545 ntBASIC10.28□□□□□ -0.76
Ube2d3P61079 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.28□□□□□ -0.76
Ube2d3P61079 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Ube2d3P61079 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Ube2d3P61079 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC10.28□□□□□ -0.76
Ube2d3P61079 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC10.28□□□□□ -0.76
Ube2d3P61079 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Ube2d3P61079 Mir5126-201ENSMUST00000175513 77 ntBASIC10.28□□□□□ -0.76
Ube2d3P61079 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC10.28□□□□□ -0.76
Ube2d3P61079 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC10.28□□□□□ -0.76
Ube2d3P61079 Gm2272-201ENSMUST00000194903 582 ntBASIC10.28□□□□□ -0.76
Ube2d3P61079 AC084391.1-201ENSMUST00000200651 141 ntBASIC10.28□□□□□ -0.76
Ube2d3P61079 Gm18195-201ENSMUST00000207604 706 ntBASIC10.28□□□□□ -0.76
Ube2d3P61079 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Ube2d3P61079 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Ube2d3P61079 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Gm15590-201ENSMUST00000078419 552 ntBASIC10.28□□□□□ -0.76
Ube2d3P61079 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.28□□□□□ -0.76
Ube2d3P61079 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Ube2d3P61079 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Ube2d3P61079 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.28□□□□□ -0.76
Ube2d3P61079 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.28□□□□□ -0.76
Ube2d3P61079 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube2d3P61079 Gm14451-201ENSMUST00000121581 1542 ntBASIC10.28□□□□□ -0.76
Ube2d3P61079 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ube2d3P61079 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC10.27□□□□□ -0.76
Ube2d3P61079 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.76
Ube2d3P61079 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ube2d3P61079 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Ube2d3P61079 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.27□□□□□ -0.76
Ube2d3P61079 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ube2d3P61079 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Ube2d3P61079 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ube2d3P61079 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ube2d3P61079 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC10.27□□□□□ -0.77
Ube2d3P61079 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC10.27□□□□□ -0.77
Ube2d3P61079 Mir5131-201ENSMUST00000175426 93 ntBASIC10.27□□□□□ -0.77
Ube2d3P61079 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC10.27□□□□□ -0.77
Ube2d3P61079 AC130671.1-201ENSMUST00000227384 1237 ntBASIC10.27□□□□□ -0.77
Ube2d3P61079 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC10.27□□□□□ -0.77
Ube2d3P61079 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.27□□□□□ -0.77
Ube2d3P61079 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms