Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Sf3b6P59708 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.73□□□□□ -0.37
Sf3b6P59708 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Gm6089-201ENSMUST00000197666 938 ntBASIC12.73□□□□□ -0.37
Sf3b6P59708 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.73□□□□□ -0.37
Sf3b6P59708 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sf3b6P59708 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.72□□□□□ -0.37
Sf3b6P59708 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.72□□□□□ -0.37
Sf3b6P59708 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sf3b6P59708 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.72□□□□□ -0.37
Sf3b6P59708 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Sf3b6P59708 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sf3b6P59708 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.72□□□□□ -0.37
Sf3b6P59708 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.72□□□□□ -0.37
Sf3b6P59708 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sf3b6P59708 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 Gm11434-201ENSMUST00000122379 629 ntBASIC12.72□□□□□ -0.37
Sf3b6P59708 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.72□□□□□ -0.37
Sf3b6P59708 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sf3b6P59708 Gm7230-201ENSMUST00000173026 815 ntBASIC12.72□□□□□ -0.37
Sf3b6P59708 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.72□□□□□ -0.37
Sf3b6P59708 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.72□□□□□ -0.37
Sf3b6P59708 Gm18246-201ENSMUST00000221023 728 ntBASIC12.72□□□□□ -0.37
Sf3b6P59708 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.72□□□□□ -0.37
Sf3b6P59708 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sf3b6P59708 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.72□□□□□ -0.37
Sf3b6P59708 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.72□□□□□ -0.37
Sf3b6P59708 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.72□□□□□ -0.37
Sf3b6P59708 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3b6P59708 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3b6P59708 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3b6P59708 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Sf3b6P59708 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
Sf3b6P59708 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3b6P59708 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3b6P59708 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3b6P59708 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3b6P59708 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.71□□□□□ -0.37
Sf3b6P59708 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.71□□□□□ -0.37
Sf3b6P59708 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3b6P59708 Gm7222-201ENSMUST00000117512 906 ntBASIC12.71□□□□□ -0.37
Sf3b6P59708 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Sf3b6P59708 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.71□□□□□ -0.37
Sf3b6P59708 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3b6P59708 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Sf3b6P59708 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3b6P59708 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.71□□□□□ -0.37
Sf3b6P59708 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.71□□□□□ -0.37
Sf3b6P59708 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3b6P59708 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.71□□□□□ -0.38
Sf3b6P59708 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3b6P59708 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3b6P59708 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.71□□□□□ -0.38
Sf3b6P59708 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3b6P59708 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3b6P59708 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3b6P59708 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3b6P59708 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3b6P59708 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms