Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC19.23■□□□□ 0.67
Nphp4P59240 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nphp4P59240 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nphp4P59240 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Nphp4P59240 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nphp4P59240 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC19.23■□□□□ 0.67
Nphp4P59240 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Nphp4P59240 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nphp4P59240 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nphp4P59240 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nphp4P59240 Gm12485-201ENSMUST00000119641 291 ntBASIC19.23■□□□□ 0.67
Nphp4P59240 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC19.23■□□□□ 0.67
Nphp4P59240 Gm15429-201ENSMUST00000151268 798 ntBASIC19.23■□□□□ 0.67
Nphp4P59240 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nphp4P59240 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Nphp4P59240 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nphp4P59240 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nphp4P59240 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nphp4P59240 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nphp4P59240 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nphp4P59240 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nphp4P59240 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Nphp4P59240 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Nphp4P59240 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nphp4P59240 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nphp4P59240 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Nphp4P59240 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nphp4P59240 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nphp4P59240 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Nphp4P59240 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Nphp4P59240 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Nphp4P59240 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nphp4P59240 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nphp4P59240 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Nphp4P59240 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nphp4P59240 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nphp4P59240 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC19.22■□□□□ 0.67
Nphp4P59240 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nphp4P59240 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nphp4P59240 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nphp4P59240 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nphp4P59240 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nphp4P59240 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nphp4P59240 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nphp4P59240 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nphp4P59240 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nphp4P59240 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nphp4P59240 Mir698-201ENSMUST00000102164 109 ntBASIC19.21■□□□□ 0.67
Nphp4P59240 Gm13829-201ENSMUST00000119600 138 ntBASIC19.21■□□□□ 0.67
Nphp4P59240 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC19.21■□□□□ 0.67
Nphp4P59240 Gm14730-201ENSMUST00000122378 1045 ntBASIC19.21■□□□□ 0.67
Nphp4P59240 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Nphp4P59240 Gm6244-201ENSMUST00000178732 841 ntBASIC19.21■□□□□ 0.67
Nphp4P59240 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nphp4P59240 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
Nphp4P59240 Gm7498-201ENSMUST00000203282 1084 ntBASIC19.21■□□□□ 0.67
Nphp4P59240 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC19.21■□□□□ 0.67
Nphp4P59240 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC19.21■□□□□ 0.67
Nphp4P59240 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nphp4P59240 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nphp4P59240 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nphp4P59240 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Nphp4P59240 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nphp4P59240 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nphp4P59240 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nphp4P59240 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nphp4P59240 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC19.21■□□□□ 0.67
Nphp4P59240 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
Nphp4P59240 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nphp4P59240 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC19.2■□□□□ 0.66
Nphp4P59240 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Nphp4P59240 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Nphp4P59240 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nphp4P59240 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nphp4P59240 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nphp4P59240 Gm5303-201ENSMUST00000117943 1252 ntBASIC19.2■□□□□ 0.66
Nphp4P59240 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Nphp4P59240 Mir7085-201ENSMUST00000184353 66 ntBASIC19.2■□□□□ 0.66
Nphp4P59240 Gm27892-201ENSMUST00000185017 106 ntBASIC19.2■□□□□ 0.66
Nphp4P59240 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC19.2■□□□□ 0.66
Nphp4P59240 Gm6266-201ENSMUST00000203844 806 ntBASIC19.2■□□□□ 0.66
Nphp4P59240 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC19.2■□□□□ 0.66
Nphp4P59240 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Nphp4P59240 Gm8775-201ENSMUST00000170943 1327 ntBASIC19.2■□□□□ 0.66
Nphp4P59240 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nphp4P59240 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nphp4P59240 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC19.2■□□□□ 0.66
Nphp4P59240 Gm45504-201ENSMUST00000211407 2107 ntBASIC19.2■□□□□ 0.66
Nphp4P59240 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nphp4P59240 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nphp4P59240 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Nphp4P59240 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 Gm37812-201ENSMUST00000195216 2475 ntBASIC19.19■□□□□ 0.66
Nphp4P59240 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC19.19■□□□□ 0.66
Nphp4P59240 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 Gm6983-201ENSMUST00000214912 628 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms