Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sssca1P56873 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.61□□□□□ -0.55
Sssca1P56873 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.6□□□□□ -0.55
Sssca1P56873 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
Sssca1P56873 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.6□□□□□ -0.55
Sssca1P56873 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.6□□□□□ -0.55
Sssca1P56873 Gm7230-201ENSMUST00000173026 815 ntBASIC11.6□□□□□ -0.55
Sssca1P56873 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.6□□□□□ -0.55
Sssca1P56873 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Sssca1P56873 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.6□□□□□ -0.55
Sssca1P56873 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.6□□□□□ -0.55
Sssca1P56873 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sssca1P56873 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Sssca1P56873 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.6□□□□□ -0.55
Sssca1P56873 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.6□□□□□ -0.55
Sssca1P56873 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sssca1P56873 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.59□□□□□ -0.55
Sssca1P56873 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sssca1P56873 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Sssca1P56873 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sssca1P56873 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.59□□□□□ -0.55
Sssca1P56873 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.59□□□□□ -0.55
Sssca1P56873 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.59□□□□□ -0.55
Sssca1P56873 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sssca1P56873 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sssca1P56873 Gm4899-201ENSMUST00000178708 719 ntBASIC11.59□□□□□ -0.55
Sssca1P56873 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.59□□□□□ -0.55
Sssca1P56873 Rps4l-201ENSMUST00000071745 943 ntBASIC11.59□□□□□ -0.55
Sssca1P56873 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sssca1P56873 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.59□□□□□ -0.55
Sssca1P56873 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
Sssca1P56873 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.59□□□□□ -0.55
Sssca1P56873 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms