Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp1P56183 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp1P56183 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp1P56183 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp1P56183 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rrp1P56183 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp1P56183 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp1P56183 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp1P56183 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp1P56183 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.17■□□□□ 0.18
Rrp1P56183 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp1P56183 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp1P56183 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp1P56183 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp1P56183 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp1P56183 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp1P56183 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp1P56183 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp1P56183 Gm5479-201ENSMUST00000160578 435 ntBASIC16.17■□□□□ 0.18
Rrp1P56183 Gm43514-201ENSMUST00000198852 424 ntBASIC16.17■□□□□ 0.18
Rrp1P56183 Gm18206-201ENSMUST00000207027 926 ntBASIC16.17■□□□□ 0.18
Rrp1P56183 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp1P56183 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp1P56183 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp1P56183 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.17■□□□□ 0.18
Rrp1P56183 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp1P56183 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rrp1P56183 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.16■□□□□ 0.18
Rrp1P56183 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Rrp1P56183 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp1P56183 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.16■□□□□ 0.18
Rrp1P56183 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp1P56183 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp1P56183 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp1P56183 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp1P56183 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp1P56183 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp1P56183 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rrp1P56183 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp1P56183 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp1P56183 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Rrp1P56183 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Rrp1P56183 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Rrp1P56183 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rrp1P56183 Gm10275-202ENSMUST00000168697 495 ntBASIC16.16■□□□□ 0.18
Rrp1P56183 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.16■□□□□ 0.18
Rrp1P56183 Gm5177-201ENSMUST00000183092 997 ntBASIC16.16■□□□□ 0.18
Rrp1P56183 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rrp1P56183 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp1P56183 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.16■□□□□ 0.18
Rrp1P56183 Gm10275-201ENSMUST00000092620 635 ntBASIC16.16■□□□□ 0.18
Rrp1P56183 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.16■□□□□ 0.18
Rrp1P56183 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp1P56183 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp1P56183 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp1P56183 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp1P56183 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
Rrp1P56183 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rrp1P56183 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp1P56183 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp1P56183 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp1P56183 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp1P56183 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Rrp1P56183 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp1P56183 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp1P56183 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Rrp1P56183 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Rrp1P56183 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp1P56183 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.15■□□□□ 0.18
Rrp1P56183 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.15■□□□□ 0.18
Rrp1P56183 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp1P56183 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp1P56183 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rrp1P56183 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp1P56183 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.15■□□□□ 0.18
Rrp1P56183 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp1P56183 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp1P56183 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp1P56183 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.15■□□□□ 0.18
Rrp1P56183 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
Rrp1P56183 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp1P56183 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.15■□□□□ 0.18
Rrp1P56183 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp1P56183 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp1P56183 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp1P56183 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp1P56183 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.15■□□□□ 0.18
Rrp1P56183 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp1P56183 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rrp1P56183 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rrp1P56183 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rrp1P56183 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp1P56183 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rrp1P56183 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.14■□□□□ 0.17
Rrp1P56183 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp1P56183 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp1P56183 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp1P56183 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.14■□□□□ 0.17
Rrp1P56183 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rrp1P56183 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms