Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NrlP54846 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NrlP54846 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NrlP54846 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NrlP54846 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NrlP54846 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NrlP54846 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.27■□□□□ 0.04
NrlP54846 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NrlP54846 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NrlP54846 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NrlP54846 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.27■□□□□ 0.04
NrlP54846 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NrlP54846 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NrlP54846 Gm12091-201ENSMUST00000146791 830 ntBASIC15.27■□□□□ 0.04
NrlP54846 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NrlP54846 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.27■□□□□ 0.04
NrlP54846 Gm37230-201ENSMUST00000194491 818 ntBASIC15.27■□□□□ 0.04
NrlP54846 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.27■□□□□ 0.04
NrlP54846 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.27■□□□□ 0.04
NrlP54846 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NrlP54846 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NrlP54846 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NrlP54846 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NrlP54846 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NrlP54846 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
NrlP54846 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
NrlP54846 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NrlP54846 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
NrlP54846 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NrlP54846 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NrlP54846 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NrlP54846 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NrlP54846 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NrlP54846 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.26■□□□□ 0.03
NrlP54846 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Gm6912-201ENSMUST00000117218 544 ntBASIC15.26■□□□□ 0.03
NrlP54846 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.26■□□□□ 0.03
NrlP54846 Gm12138-201ENSMUST00000122180 951 ntBASIC15.26■□□□□ 0.03
NrlP54846 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.26■□□□□ 0.03
NrlP54846 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
NrlP54846 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Gm9908-201ENSMUST00000211534 448 ntBASIC15.26■□□□□ 0.03
NrlP54846 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.26■□□□□ 0.03
NrlP54846 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.26■□□□□ 0.03
NrlP54846 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NrlP54846 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NrlP54846 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.26■□□□□ 0.03
NrlP54846 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.26■□□□□ 0.03
NrlP54846 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NrlP54846 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.25■□□□□ 0.03
NrlP54846 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NrlP54846 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.25■□□□□ 0.03
NrlP54846 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NrlP54846 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 Gm21854-201ENSMUST00000179901 471 ntBASIC15.25■□□□□ 0.03
NrlP54846 Gm9726-201ENSMUST00000180321 678 ntBASIC15.25■□□□□ 0.03
NrlP54846 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NrlP54846 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.25■□□□□ 0.03
NrlP54846 Gm37917-201ENSMUST00000194711 392 ntBASIC15.25■□□□□ 0.03
NrlP54846 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NrlP54846 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NrlP54846 Mir125a-201ENSMUST00000083545 68 ntBASIC15.25■□□□□ 0.03
NrlP54846 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.25■□□□□ 0.03
NrlP54846 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NrlP54846 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms