Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC18.04■□□□□ 0.48
Msh6P54276 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Msh6P54276 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Msh6P54276 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh6P54276 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC18.03■□□□□ 0.48
Msh6P54276 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Msh6P54276 Gm6159-201ENSMUST00000191249 1724 ntBASIC18.03■□□□□ 0.48
Msh6P54276 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh6P54276 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh6P54276 Gm9109-201ENSMUST00000120254 1405 ntBASIC18.03■□□□□ 0.48
Msh6P54276 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC18.03■□□□□ 0.48
Msh6P54276 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh6P54276 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Msh6P54276 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh6P54276 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Msh6P54276 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh6P54276 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC18.03■□□□□ 0.48
Msh6P54276 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Msh6P54276 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Msh6P54276 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh6P54276 Gm2495-201ENSMUST00000191160 466 ntBASIC18.03■□□□□ 0.48
Msh6P54276 Gm18307-201ENSMUST00000206864 949 ntBASIC18.03■□□□□ 0.48
Msh6P54276 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Msh6P54276 Gm45331-201ENSMUST00000209868 554 ntBASIC18.03■□□□□ 0.48
Msh6P54276 Gm45504-201ENSMUST00000211407 2107 ntBASIC18.03■□□□□ 0.48
Msh6P54276 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh6P54276 Gm7446-201ENSMUST00000221035 1240 ntBASIC18.03■□□□□ 0.48
Msh6P54276 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh6P54276 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Msh6P54276 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Msh6P54276 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Msh6P54276 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Msh6P54276 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Msh6P54276 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Msh6P54276 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Msh6P54276 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Msh6P54276 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Msh6P54276 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Msh6P54276 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Msh6P54276 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Msh6P54276 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Msh6P54276 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Msh6P54276 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Msh6P54276 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Msh6P54276 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Msh6P54276 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Msh6P54276 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Msh6P54276 Gm12742-201ENSMUST00000117326 410 ntBASIC18.02■□□□□ 0.47
Msh6P54276 Gm12957-201ENSMUST00000117835 377 ntBASIC18.02■□□□□ 0.47
Msh6P54276 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
Msh6P54276 Gm21470-201ENSMUST00000187680 696 ntBASIC18.02■□□□□ 0.47
Msh6P54276 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC18.02■□□□□ 0.47
Msh6P54276 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Msh6P54276 AC156560.2-201ENSMUST00000221232 264 ntBASIC18.02■□□□□ 0.47
Msh6P54276 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Msh6P54276 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Msh6P54276 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC18.02■□□□□ 0.47
Msh6P54276 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Msh6P54276 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Msh6P54276 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh6P54276 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh6P54276 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh6P54276 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh6P54276 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh6P54276 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh6P54276 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh6P54276 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Msh6P54276 AC121801.1-201ENSMUST00000225363 1899 ntBASIC18.01■□□□□ 0.47
Msh6P54276 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh6P54276 Gm13226-201ENSMUST00000117838 404 ntBASIC18.01■□□□□ 0.47
Msh6P54276 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Msh6P54276 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC18.01■□□□□ 0.47
Msh6P54276 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC18.01■□□□□ 0.47
Msh6P54276 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC18.01■□□□□ 0.47
Msh6P54276 AC110817.1-201ENSMUST00000225706 605 ntBASIC18.01■□□□□ 0.47
Msh6P54276 AC115735.4-201ENSMUST00000227460 1944 ntBASIC18.01■□□□□ 0.47
Msh6P54276 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Msh6P54276 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh6P54276 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Msh6P54276 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Msh6P54276 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Msh6P54276 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18■□□□□ 0.47
Msh6P54276 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh6P54276 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Msh6P54276 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18■□□□□ 0.47
Msh6P54276 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC18■□□□□ 0.47
Msh6P54276 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC18■□□□□ 0.47
Msh6P54276 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC18■□□□□ 0.47
Msh6P54276 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh6P54276 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh6P54276 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh6P54276 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh6P54276 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC18■□□□□ 0.47
Msh6P54276 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms