Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atxn1P54254 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.22□□□□□ -0.13
Atxn1P54254 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.22□□□□□ -0.13
Atxn1P54254 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atxn1P54254 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Atxn1P54254 Gm9257-201ENSMUST00000221254 232 ntBASIC14.22□□□□□ -0.13
Atxn1P54254 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.22□□□□□ -0.13
Atxn1P54254 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Atxn1P54254 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Atxn1P54254 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atxn1P54254 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.22□□□□□ -0.13
Atxn1P54254 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.22□□□□□ -0.13
Atxn1P54254 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atxn1P54254 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atxn1P54254 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atxn1P54254 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atxn1P54254 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atxn1P54254 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atxn1P54254 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atxn1P54254 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Atxn1P54254 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atxn1P54254 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Atxn1P54254 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Atxn1P54254 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
Atxn1P54254 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Atxn1P54254 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.21□□□□□ -0.13
Atxn1P54254 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Atxn1P54254 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 Mir3102-201ENSMUST00000175555 104 ntBASIC14.21□□□□□ -0.13
Atxn1P54254 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.21□□□□□ -0.13
Atxn1P54254 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
Atxn1P54254 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atxn1P54254 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atxn1P54254 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atxn1P54254 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atxn1P54254 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atxn1P54254 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atxn1P54254 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atxn1P54254 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Atxn1P54254 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atxn1P54254 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Atxn1P54254 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Atxn1P54254 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atxn1P54254 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atxn1P54254 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atxn1P54254 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atxn1P54254 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atxn1P54254 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atxn1P54254 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.2□□□□□ -0.14
Atxn1P54254 Gm13392-201ENSMUST00000117708 150 ntBASIC14.2□□□□□ -0.14
Atxn1P54254 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.2□□□□□ -0.14
Atxn1P54254 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Atxn1P54254 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Atxn1P54254 Gm21854-201ENSMUST00000179901 471 ntBASIC14.2□□□□□ -0.14
Atxn1P54254 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Atxn1P54254 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Atxn1P54254 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.2□□□□□ -0.14
Atxn1P54254 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.2□□□□□ -0.14
Atxn1P54254 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.2□□□□□ -0.14
Atxn1P54254 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.2□□□□□ -0.14
Atxn1P54254 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Atxn1P54254 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atxn1P54254 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atxn1P54254 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atxn1P54254 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Atxn1P54254 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Atxn1P54254 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atxn1P54254 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atxn1P54254 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Atxn1P54254 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atxn1P54254 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atxn1P54254 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.2□□□□□ -0.14
Atxn1P54254 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atxn1P54254 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atxn1P54254 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atxn1P54254 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Atxn1P54254 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Atxn1P54254 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Atxn1P54254 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Atxn1P54254 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.19□□□□□ -0.14
Atxn1P54254 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Atxn1P54254 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms