Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sox1P53783 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.56□□□□□ -0.08
Sox1P53783 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Sox1P53783 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.55□□□□□ -0.08
Sox1P53783 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
Sox1P53783 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.55□□□□□ -0.08
Sox1P53783 Gm11628-201ENSMUST00000117568 171 ntBASIC14.55□□□□□ -0.08
Sox1P53783 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Gm8810-201ENSMUST00000172895 754 ntBASIC14.55□□□□□ -0.08
Sox1P53783 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Gm5523-201ENSMUST00000180415 997 ntBASIC14.55□□□□□ -0.08
Sox1P53783 Gm43947-201ENSMUST00000203019 959 ntBASIC14.55□□□□□ -0.08
Sox1P53783 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox1P53783 Gm8598-201ENSMUST00000221184 836 ntBASIC14.55□□□□□ -0.08
Sox1P53783 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.55□□□□□ -0.08
Sox1P53783 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox1P53783 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.55□□□□□ -0.08
Sox1P53783 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Sox1P53783 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.55□□□□□ -0.08
Sox1P53783 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sox1P53783 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox1P53783 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox1P53783 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox1P53783 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Sox1P53783 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.54□□□□□ -0.08
Sox1P53783 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox1P53783 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox1P53783 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox1P53783 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox1P53783 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Sox1P53783 Gm15240-201ENSMUST00000118156 720 ntBASIC14.54□□□□□ -0.08
Sox1P53783 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.54□□□□□ -0.08
Sox1P53783 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.54□□□□□ -0.08
Sox1P53783 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sox1P53783 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.54□□□□□ -0.08
Sox1P53783 Gm27682-201ENSMUST00000183930 110 ntBASIC14.54□□□□□ -0.08
Sox1P53783 Gm38158-201ENSMUST00000194617 339 ntBASIC14.54□□□□□ -0.08
Sox1P53783 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.54□□□□□ -0.08
Sox1P53783 Gm29705-201ENSMUST00000212598 474 ntBASIC14.54□□□□□ -0.08
Sox1P53783 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.54□□□□□ -0.08
Sox1P53783 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox1P53783 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sox1P53783 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox1P53783 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox1P53783 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox1P53783 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox1P53783 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox1P53783 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox1P53783 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.54□□□□□ -0.08
Sox1P53783 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox1P53783 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox1P53783 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox1P53783 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox1P53783 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox1P53783 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox1P53783 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Sox1P53783 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox1P53783 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox1P53783 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox1P53783 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox1P53783 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox1P53783 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox1P53783 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.53□□□□□ -0.08
Sox1P53783 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox1P53783 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox1P53783 Celf4-206ENSMUST00000224553 1729 ntBASIC14.53□□□□□ -0.08
Sox1P53783 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.53□□□□□ -0.08
Sox1P53783 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sox1P53783 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox1P53783 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox1P53783 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.53□□□□□ -0.08
Sox1P53783 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.53□□□□□ -0.08
Sox1P53783 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.53□□□□□ -0.08
Sox1P53783 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.53□□□□□ -0.08
Sox1P53783 Gm42997-202ENSMUST00000200321 985 ntBASIC14.53□□□□□ -0.08
Sox1P53783 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.53□□□□□ -0.08
Sox1P53783 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms