Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.19□□□□□ -0.14
Pdx1P52946 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.19□□□□□ -0.14
Pdx1P52946 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.19□□□□□ -0.14
Pdx1P52946 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.19□□□□□ -0.14
Pdx1P52946 Gm25948-201ENSMUST00000175334 112 ntBASIC14.19□□□□□ -0.14
Pdx1P52946 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.19□□□□□ -0.14
Pdx1P52946 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.19□□□□□ -0.14
Pdx1P52946 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pdx1P52946 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pdx1P52946 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pdx1P52946 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pdx1P52946 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.19□□□□□ -0.14
Pdx1P52946 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.18□□□□□ -0.14
Pdx1P52946 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pdx1P52946 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.18□□□□□ -0.14
Pdx1P52946 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pdx1P52946 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.18□□□□□ -0.14
Pdx1P52946 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.18□□□□□ -0.14
Pdx1P52946 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Pdx1P52946 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.18□□□□□ -0.14
Pdx1P52946 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.18□□□□□ -0.14
Pdx1P52946 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.18□□□□□ -0.14
Pdx1P52946 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pdx1P52946 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdx1P52946 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pdx1P52946 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.17□□□□□ -0.14
Pdx1P52946 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Gm6415-201ENSMUST00000118488 348 ntBASIC14.17□□□□□ -0.14
Pdx1P52946 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.17□□□□□ -0.14
Pdx1P52946 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pdx1P52946 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.17□□□□□ -0.14
Pdx1P52946 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.17□□□□□ -0.14
Pdx1P52946 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.17□□□□□ -0.14
Pdx1P52946 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Pdx1P52946 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pdx1P52946 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.17□□□□□ -0.14
Pdx1P52946 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms