Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.03■□□□□ 0.32
Ercc3P49135 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.03■□□□□ 0.32
Ercc3P49135 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ercc3P49135 Gm29310-201ENSMUST00000185468 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm21825-201ENSMUST00000185728 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm29109-201ENSMUST00000185895 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm21896-201ENSMUST00000186520 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm21873-201ENSMUST00000186728 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm21794-201ENSMUST00000187056 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm21880-201ENSMUST00000187275 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm21826-201ENSMUST00000187451 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm21198-201ENSMUST00000188393 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm21749-201ENSMUST00000189343 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm21901-201ENSMUST00000189568 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm29424-201ENSMUST00000189716 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm28599-201ENSMUST00000189838 694 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm21867-201ENSMUST00000189917 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm29269-201ENSMUST00000190087 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm21722-201ENSMUST00000190153 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm28423-201ENSMUST00000190701 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm21899-201ENSMUST00000190745 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm21910-201ENSMUST00000191163 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm21849-201ENSMUST00000191571 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm28678-201ENSMUST00000191593 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 Gm20910-201ENSMUST00000193268 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Gm21871-201ENSMUST00000194621 696 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC17.03■□□□□ 0.32
Ercc3P49135 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ercc3P49135 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ercc3P49135 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ercc3P49135 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ercc3P49135 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ercc3P49135 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ercc3P49135 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ercc3P49135 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Ercc3P49135 Gm8410-201ENSMUST00000117225 605 ntBASIC17.02■□□□□ 0.32
Ercc3P49135 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.02■□□□□ 0.32
Ercc3P49135 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ercc3P49135 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ercc3P49135 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ercc3P49135 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ercc3P49135 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ercc3P49135 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ercc3P49135 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.02■□□□□ 0.32
Ercc3P49135 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ercc3P49135 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
Ercc3P49135 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ercc3P49135 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ercc3P49135 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.02■□□□□ 0.31
Ercc3P49135 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ercc3P49135 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ercc3P49135 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc3P49135 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc3P49135 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Ercc3P49135 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ercc3P49135 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Ercc3P49135 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc3P49135 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.01■□□□□ 0.31
Ercc3P49135 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc3P49135 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc3P49135 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc3P49135 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc3P49135 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Ercc3P49135 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.01■□□□□ 0.31
Ercc3P49135 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc3P49135 Gm13223-201ENSMUST00000118609 747 ntBASIC17.01■□□□□ 0.31
Ercc3P49135 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.01■□□□□ 0.31
Ercc3P49135 Gm23547-201ENSMUST00000158210 271 ntBASIC17.01■□□□□ 0.31
Ercc3P49135 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ercc3P49135 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc3P49135 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc3P49135 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Ercc3P49135 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc3P49135 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc3P49135 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ercc3P49135 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc3P49135 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ercc3P49135 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ercc3P49135 CT025610.1-201ENSMUST00000224552 1786 ntBASIC17■□□□□ 0.31
Ercc3P49135 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17■□□□□ 0.31
Ercc3P49135 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ercc3P49135 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ercc3P49135 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ercc3P49135 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17■□□□□ 0.31
Ercc3P49135 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Ercc3P49135 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Ercc3P49135 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17■□□□□ 0.31
Ercc3P49135 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ercc3P49135 Gm28630-201ENSMUST00000187806 498 ntBASIC17■□□□□ 0.31
Ercc3P49135 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17■□□□□ 0.31
Ercc3P49135 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms