Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Gm13616-201ENSMUST00000120600 222 ntBASIC14.01□□□□□ -0.17
Gli1P47806 Gm27494-201ENSMUST00000184735 189 ntBASIC14.01□□□□□ -0.17
Gli1P47806 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.01□□□□□ -0.17
Gli1P47806 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Gli1P47806 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Gli1P47806 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.01□□□□□ -0.17
Gli1P47806 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Gli1P47806 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Gli1P47806 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Gli1P47806 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Gli1P47806 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Gli1P47806 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14□□□□□ -0.17
Gli1P47806 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14□□□□□ -0.17
Gli1P47806 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
Gli1P47806 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14□□□□□ -0.17
Gli1P47806 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14□□□□□ -0.17
Gli1P47806 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14□□□□□ -0.17
Gli1P47806 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14□□□□□ -0.17
Gli1P47806 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Gm19863-201ENSMUST00000192480 2218 ntBASIC14□□□□□ -0.17
Gli1P47806 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gli1P47806 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gli1P47806 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gli1P47806 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
Gli1P47806 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gli1P47806 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Gli1P47806 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gli1P47806 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gli1P47806 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gli1P47806 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gli1P47806 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gli1P47806 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gli1P47806 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Gli1P47806 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gli1P47806 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gli1P47806 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gli1P47806 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gli1P47806 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gli1P47806 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gli1P47806 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Gli1P47806 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.99□□□□□ -0.17
Gli1P47806 AA543401-201ENSMUST00000164248 1269 ntBASIC13.99□□□□□ -0.17
Gli1P47806 Gm18489-201ENSMUST00000172565 551 ntBASIC13.99□□□□□ -0.17
Gli1P47806 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms