Protein–RNA interactions for Protein: P46099

Klf1, Krueppel-like factor 1, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Klf1P46099 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Klf1P46099 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Klf1P46099 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Gm22189-201ENSMUST00000103822 86 ntBASIC14.82□□□□□ -0.04
Klf1P46099 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.82□□□□□ -0.04
Klf1P46099 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.82□□□□□ -0.04
Klf1P46099 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.82□□□□□ -0.04
Klf1P46099 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.82□□□□□ -0.04
Klf1P46099 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.82□□□□□ -0.04
Klf1P46099 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.82□□□□□ -0.04
Klf1P46099 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.82□□□□□ -0.04
Klf1P46099 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Klf1P46099 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Klf1P46099 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.82□□□□□ -0.04
Klf1P46099 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Klf1P46099 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Klf1P46099 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Klf1P46099 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Klf1P46099 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.81□□□□□ -0.04
Klf1P46099 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Klf1P46099 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Klf1P46099 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Klf1P46099 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Klf1P46099 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Klf1P46099 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Klf1P46099 Gm6912-201ENSMUST00000117218 544 ntBASIC14.81□□□□□ -0.04
Klf1P46099 Gm15653-201ENSMUST00000119247 907 ntBASIC14.81□□□□□ -0.04
Klf1P46099 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.81□□□□□ -0.04
Klf1P46099 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Klf1P46099 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.81□□□□□ -0.04
Klf1P46099 Gm5479-201ENSMUST00000160578 435 ntBASIC14.81□□□□□ -0.04
Klf1P46099 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Klf1P46099 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Klf1P46099 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.81□□□□□ -0.04
Klf1P46099 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Klf1P46099 Gm8515-201ENSMUST00000194852 576 ntBASIC14.81□□□□□ -0.04
Klf1P46099 Gm43703-201ENSMUST00000200523 763 ntBASIC14.81□□□□□ -0.04
Klf1P46099 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.81□□□□□ -0.04
Klf1P46099 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Klf1P46099 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Klf1P46099 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Klf1P46099 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Klf1P46099 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Klf1P46099 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Klf1P46099 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Klf1P46099 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Klf1P46099 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Klf1P46099 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Klf1P46099 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Klf1P46099 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.81□□□□□ -0.04
Klf1P46099 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Klf1P46099 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Klf1P46099 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Klf1P46099 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Klf1P46099 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Klf1P46099 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Klf1P46099 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Klf1P46099 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Klf1P46099 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Klf1P46099 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Klf1P46099 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Klf1P46099 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Klf1P46099 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Klf1P46099 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Klf1P46099 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Klf1P46099 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.8□□□□□ -0.04
Klf1P46099 Gm4875-201ENSMUST00000118257 786 ntBASIC14.8□□□□□ -0.04
Klf1P46099 Gm14042-201ENSMUST00000120139 833 ntBASIC14.8□□□□□ -0.04
Klf1P46099 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.8□□□□□ -0.04
Klf1P46099 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Klf1P46099 Gm6745-201ENSMUST00000199216 526 ntBASIC14.8□□□□□ -0.04
Klf1P46099 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Klf1P46099 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Klf1P46099 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Klf1P46099 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Klf1P46099 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.8□□□□□ -0.04
Klf1P46099 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms