Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Gm27301-201ENSMUST00000184012 127 ntBASIC13.85□□□□□ -0.19
Tnfsf4P43488 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf4P43488 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf4P43488 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf4P43488 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Tnfsf4P43488 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.84□□□□□ -0.19
Tnfsf4P43488 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.84□□□□□ -0.19
Tnfsf4P43488 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Tnfsf4P43488 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Gm5479-201ENSMUST00000160578 435 ntBASIC13.84□□□□□ -0.19
Tnfsf4P43488 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.84□□□□□ -0.19
Tnfsf4P43488 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.84□□□□□ -0.19
Tnfsf4P43488 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.84□□□□□ -0.19
Tnfsf4P43488 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf4P43488 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Tnfsf4P43488 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsf4P43488 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsf4P43488 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Tnfsf4P43488 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsf4P43488 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsf4P43488 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsf4P43488 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsf4P43488 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsf4P43488 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsf4P43488 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsf4P43488 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsf4P43488 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsf4P43488 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsf4P43488 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.83□□□□□ -0.2
Tnfsf4P43488 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsf4P43488 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.83□□□□□ -0.2
Tnfsf4P43488 Gm45747-201ENSMUST00000212203 999 ntBASIC13.83□□□□□ -0.2
Tnfsf4P43488 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsf4P43488 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsf4P43488 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsf4P43488 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsf4P43488 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms