Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.78□□□□□ -0.04
Msh2P43247 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh2P43247 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Msh2P43247 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh2P43247 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh2P43247 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Msh2P43247 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Msh2P43247 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh2P43247 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh2P43247 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Msh2P43247 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh2P43247 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Msh2P43247 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msh2P43247 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msh2P43247 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Msh2P43247 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Msh2P43247 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msh2P43247 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msh2P43247 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Msh2P43247 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
Msh2P43247 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msh2P43247 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Msh2P43247 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.77□□□□□ -0.04
Msh2P43247 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.77□□□□□ -0.04
Msh2P43247 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msh2P43247 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msh2P43247 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msh2P43247 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.77□□□□□ -0.05
Msh2P43247 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msh2P43247 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Msh2P43247 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.77□□□□□ -0.05
Msh2P43247 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.77□□□□□ -0.05
Msh2P43247 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.77□□□□□ -0.05
Msh2P43247 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msh2P43247 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msh2P43247 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msh2P43247 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Msh2P43247 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msh2P43247 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msh2P43247 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msh2P43247 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msh2P43247 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
Msh2P43247 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.77□□□□□ -0.05
Msh2P43247 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msh2P43247 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Msh2P43247 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Msh2P43247 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msh2P43247 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Msh2P43247 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.76□□□□□ -0.05
Msh2P43247 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Msh2P43247 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.76□□□□□ -0.05
Msh2P43247 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Msh2P43247 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.76□□□□□ -0.05
Msh2P43247 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.76□□□□□ -0.05
Msh2P43247 Gm44492-201ENSMUST00000197012 141 ntBASIC14.76□□□□□ -0.05
Msh2P43247 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.76□□□□□ -0.05
Msh2P43247 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Thap2-203ENSMUST00000218989 527 ntBASIC14.76□□□□□ -0.05
Msh2P43247 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Msh2P43247 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.76□□□□□ -0.05
Msh2P43247 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Msh2P43247 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh2P43247 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh2P43247 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Msh2P43247 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Msh2P43247 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Msh2P43247 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh2P43247 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh2P43247 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh2P43247 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh2P43247 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh2P43247 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh2P43247 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Msh2P43247 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.75□□□□□ -0.05
Msh2P43247 Gm11594-201ENSMUST00000122313 162 ntBASIC14.75□□□□□ -0.05
Msh2P43247 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Msh2P43247 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh2P43247 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.75□□□□□ -0.05
Msh2P43247 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.75□□□□□ -0.05
Msh2P43247 Gm45747-201ENSMUST00000212203 999 ntBASIC14.75□□□□□ -0.05
Msh2P43247 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms