Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-2P42586 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-2P42586 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-2P42586 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-2P42586 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-2P42586 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.15□□□□□ -0.3
Nkx2-2P42586 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-2P42586 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-2P42586 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-2P42586 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-2P42586 BC001981-202ENSMUST00000191393 1545 ntBASIC13.15□□□□□ -0.3
Nkx2-2P42586 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-2P42586 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-2P42586 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nkx2-2P42586 Gm5566-201ENSMUST00000116118 459 ntBASIC13.15□□□□□ -0.3
Nkx2-2P42586 Gm15957-201ENSMUST00000118893 974 ntBASIC13.15□□□□□ -0.3
Nkx2-2P42586 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.15□□□□□ -0.3
Nkx2-2P42586 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.15□□□□□ -0.3
Nkx2-2P42586 Gm26308-201ENSMUST00000157768 69 ntBASIC13.15□□□□□ -0.3
Nkx2-2P42586 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.15□□□□□ -0.3
Nkx2-2P42586 AA619741-201ENSMUST00000195095 646 ntBASIC13.15□□□□□ -0.3
Nkx2-2P42586 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-2P42586 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.15□□□□□ -0.3
Nkx2-2P42586 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.15□□□□□ -0.3
Nkx2-2P42586 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Nkx2-2P42586 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-2P42586 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nkx2-2P42586 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.15□□□□□ -0.3
Nkx2-2P42586 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-2P42586 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Nkx2-2P42586 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Nkx2-2P42586 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.31
Nkx2-2P42586 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Gm27631-201ENSMUST00000184163 466 ntBASIC13.14□□□□□ -0.31
Nkx2-2P42586 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Gm45453-201ENSMUST00000211758 853 ntBASIC13.14□□□□□ -0.31
Nkx2-2P42586 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.14□□□□□ -0.31
Nkx2-2P42586 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Nkx2-2P42586 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.14□□□□□ -0.31
Nkx2-2P42586 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Nkx2-2P42586 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Mir449b-201ENSMUST00000104833 80 ntBASIC13.13□□□□□ -0.31
Nkx2-2P42586 Gm15693-201ENSMUST00000120470 637 ntBASIC13.13□□□□□ -0.31
Nkx2-2P42586 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-2P42586 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-2P42586 Gm9719-201ENSMUST00000162765 543 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms