Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.28□□□□□ -0.12
LdlrP35951 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LdlrP35951 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LdlrP35951 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LdlrP35951 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
LdlrP35951 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LdlrP35951 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LdlrP35951 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LdlrP35951 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LdlrP35951 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LdlrP35951 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LdlrP35951 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LdlrP35951 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LdlrP35951 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LdlrP35951 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LdlrP35951 Gm14042-201ENSMUST00000120139 833 ntBASIC14.27□□□□□ -0.13
LdlrP35951 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.27□□□□□ -0.13
LdlrP35951 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LdlrP35951 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.27□□□□□ -0.13
LdlrP35951 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.27□□□□□ -0.13
LdlrP35951 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LdlrP35951 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.27□□□□□ -0.13
LdlrP35951 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.27□□□□□ -0.13
LdlrP35951 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.27□□□□□ -0.13
LdlrP35951 Gm2451-201ENSMUST00000199447 999 ntBASIC14.27□□□□□ -0.13
LdlrP35951 Gm10290-201ENSMUST00000200451 999 ntBASIC14.27□□□□□ -0.13
LdlrP35951 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LdlrP35951 Olfr286-202ENSMUST00000205305 969 ntBASIC14.27□□□□□ -0.13
LdlrP35951 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LdlrP35951 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LdlrP35951 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.27□□□□□ -0.13
LdlrP35951 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.27□□□□□ -0.13
LdlrP35951 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LdlrP35951 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
LdlrP35951 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LdlrP35951 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LdlrP35951 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LdlrP35951 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.26□□□□□ -0.13
LdlrP35951 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.26□□□□□ -0.13
LdlrP35951 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LdlrP35951 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LdlrP35951 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
LdlrP35951 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
LdlrP35951 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LdlrP35951 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
LdlrP35951 Mir1895-201ENSMUST00000122615 79 ntBASIC14.26□□□□□ -0.13
LdlrP35951 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.26□□□□□ -0.13
LdlrP35951 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LdlrP35951 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LdlrP35951 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LdlrP35951 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LdlrP35951 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LdlrP35951 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
LdlrP35951 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LdlrP35951 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LdlrP35951 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.25□□□□□ -0.13
LdlrP35951 Gm27494-201ENSMUST00000184735 189 ntBASIC14.25□□□□□ -0.13
LdlrP35951 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.25□□□□□ -0.13
LdlrP35951 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms