Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sftpa1P35242 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sftpa1P35242 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sftpa1P35242 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.19□□□□□ -0.3
Sftpa1P35242 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sftpa1P35242 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sftpa1P35242 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sftpa1P35242 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sftpa1P35242 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sftpa1P35242 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sftpa1P35242 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sftpa1P35242 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sftpa1P35242 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.18□□□□□ -0.3
Sftpa1P35242 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.18□□□□□ -0.3
Sftpa1P35242 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sftpa1P35242 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sftpa1P35242 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sftpa1P35242 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sftpa1P35242 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sftpa1P35242 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sftpa1P35242 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sftpa1P35242 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Sftpa1P35242 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sftpa1P35242 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.18□□□□□ -0.3
Sftpa1P35242 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.18□□□□□ -0.3
Sftpa1P35242 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sftpa1P35242 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.18□□□□□ -0.3
Sftpa1P35242 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.18□□□□□ -0.3
Sftpa1P35242 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sftpa1P35242 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.18□□□□□ -0.3
Sftpa1P35242 Gm10478-201ENSMUST00000084451 396 ntBASIC13.18□□□□□ -0.3
Sftpa1P35242 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sftpa1P35242 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sftpa1P35242 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Sftpa1P35242 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sftpa1P35242 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sftpa1P35242 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sftpa1P35242 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sftpa1P35242 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sftpa1P35242 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sftpa1P35242 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sftpa1P35242 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Sftpa1P35242 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.17□□□□□ -0.3
Sftpa1P35242 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Sftpa1P35242 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.17□□□□□ -0.3
Sftpa1P35242 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.17□□□□□ -0.3
Sftpa1P35242 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Mir1247-201ENSMUST00000116706 82 ntBASIC13.17□□□□□ -0.3
Sftpa1P35242 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Sftpa1P35242 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.17□□□□□ -0.3
Sftpa1P35242 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Sftpa1P35242 Gm17420-201ENSMUST00000164753 153 ntBASIC13.17□□□□□ -0.3
Sftpa1P35242 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.17□□□□□ -0.3
Sftpa1P35242 Gm37424-201ENSMUST00000191727 561 ntBASIC13.17□□□□□ -0.3
Sftpa1P35242 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Gm17794-201ENSMUST00000220252 955 ntBASIC13.17□□□□□ -0.3
Sftpa1P35242 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.17□□□□□ -0.3
Sftpa1P35242 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sftpa1P35242 Olfr582-201ENSMUST00000098212 960 ntBASIC13.17□□□□□ -0.3
Sftpa1P35242 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sftpa1P35242 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sftpa1P35242 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sftpa1P35242 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sftpa1P35242 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sftpa1P35242 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Sftpa1P35242 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.16□□□□□ -0.3
Sftpa1P35242 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms