Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Slc6a11P31650 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Slc6a11P31650 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Slc6a11P31650 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Slc6a11P31650 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Gm4899-201ENSMUST00000178708 719 ntBASIC13.62□□□□□ -0.23
Slc6a11P31650 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.62□□□□□ -0.23
Slc6a11P31650 Gm5312-201ENSMUST00000203728 547 ntBASIC13.62□□□□□ -0.23
Slc6a11P31650 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.62□□□□□ -0.23
Slc6a11P31650 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.62□□□□□ -0.23
Slc6a11P31650 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Slc6a11P31650 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.62□□□□□ -0.23
Slc6a11P31650 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.62□□□□□ -0.23
Slc6a11P31650 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Slc6a11P31650 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a11P31650 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Slc6a11P31650 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.62□□□□□ -0.23
Slc6a11P31650 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Slc6a11P31650 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Slc6a11P31650 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.61□□□□□ -0.23
Slc6a11P31650 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Slc6a11P31650 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.61□□□□□ -0.23
Slc6a11P31650 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.61□□□□□ -0.23
Slc6a11P31650 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.61□□□□□ -0.23
Slc6a11P31650 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.61□□□□□ -0.23
Slc6a11P31650 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Slc6a11P31650 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a11P31650 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a11P31650 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a11P31650 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a11P31650 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a11P31650 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a11P31650 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a11P31650 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a11P31650 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.6□□□□□ -0.23
Slc6a11P31650 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Slc6a11P31650 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Slc6a11P31650 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a11P31650 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a11P31650 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Slc6a11P31650 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a11P31650 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Slc6a11P31650 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.6□□□□□ -0.23
Slc6a11P31650 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms