Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.35□□□□□ -0.43
Slc6a1P31648 Gm27867-201ENSMUST00000184778 125 ntBASIC12.35□□□□□ -0.43
Slc6a1P31648 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.35□□□□□ -0.43
Slc6a1P31648 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.35□□□□□ -0.43
Slc6a1P31648 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.35□□□□□ -0.43
Slc6a1P31648 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.35□□□□□ -0.43
Slc6a1P31648 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.35□□□□□ -0.43
Slc6a1P31648 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.35□□□□□ -0.43
Slc6a1P31648 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.35□□□□□ -0.43
Slc6a1P31648 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Slc6a1P31648 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Slc6a1P31648 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Slc6a1P31648 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.35□□□□□ -0.43
Slc6a1P31648 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.35□□□□□ -0.43
Slc6a1P31648 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Slc6a1P31648 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc6a1P31648 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.34□□□□□ -0.43
Slc6a1P31648 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.34□□□□□ -0.43
Slc6a1P31648 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc6a1P31648 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slc6a1P31648 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc6a1P31648 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Slc6a1P31648 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc6a1P31648 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Slc6a1P31648 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc6a1P31648 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc6a1P31648 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Slc6a1P31648 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.34□□□□□ -0.43
Slc6a1P31648 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slc6a1P31648 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Slc6a1P31648 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Slc6a1P31648 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.34□□□□□ -0.43
Slc6a1P31648 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Slc6a1P31648 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Slc6a1P31648 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slc6a1P31648 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc6a1P31648 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc6a1P31648 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc6a1P31648 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc6a1P31648 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc6a1P31648 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc6a1P31648 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slc6a1P31648 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc6a1P31648 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc6a1P31648 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Slc6a1P31648 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Slc6a1P31648 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.33□□□□□ -0.43
Slc6a1P31648 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Slc6a1P31648 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Slc6a1P31648 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.33□□□□□ -0.44
Slc6a1P31648 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Slc6a1P31648 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Slc6a1P31648 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc6a1P31648 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.33□□□□□ -0.44
Slc6a1P31648 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc6a1P31648 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Slc6a1P31648 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc6a1P31648 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Slc6a1P31648 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
Slc6a1P31648 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc6a1P31648 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc6a1P31648 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Slc6a1P31648 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.33□□□□□ -0.44
Slc6a1P31648 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.33□□□□□ -0.44
Slc6a1P31648 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.33□□□□□ -0.44
Slc6a1P31648 Gm8318-201ENSMUST00000182954 872 ntBASIC12.33□□□□□ -0.44
Slc6a1P31648 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.33□□□□□ -0.44
Slc6a1P31648 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Slc6a1P31648 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc6a1P31648 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc6a1P31648 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc6a1P31648 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Slc6a1P31648 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Slc6a1P31648 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Slc6a1P31648 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc6a1P31648 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc6a1P31648 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Slc6a1P31648 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Slc6a1P31648 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Slc6a1P31648 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a1P31648 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms