Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nedd8P29595 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nedd8P29595 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nedd8P29595 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Nedd8P29595 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nedd8P29595 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nedd8P29595 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.25□□□□□ -0.29
Nedd8P29595 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nedd8P29595 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nedd8P29595 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Nedd8P29595 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nedd8P29595 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Nedd8P29595 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nedd8P29595 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Nedd8P29595 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Nedd8P29595 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nedd8P29595 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Gm18959-201ENSMUST00000208954 655 ntBASIC13.24□□□□□ -0.29
Nedd8P29595 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.24□□□□□ -0.29
Nedd8P29595 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nedd8P29595 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Nedd8P29595 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nedd8P29595 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.24□□□□□ -0.29
Nedd8P29595 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nedd8P29595 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nedd8P29595 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nedd8P29595 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nedd8P29595 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nedd8P29595 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.23□□□□□ -0.29
Nedd8P29595 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nedd8P29595 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nedd8P29595 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nedd8P29595 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nedd8P29595 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nedd8P29595 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nedd8P29595 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nedd8P29595 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nedd8P29595 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nedd8P29595 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.23□□□□□ -0.29
Nedd8P29595 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.23□□□□□ -0.29
Nedd8P29595 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.23□□□□□ -0.29
Nedd8P29595 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.23□□□□□ -0.29
Nedd8P29595 Gm18041-201ENSMUST00000218210 618 ntBASIC13.23□□□□□ -0.29
Nedd8P29595 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.23□□□□□ -0.29
Nedd8P29595 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Nedd8P29595 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Nedd8P29595 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nedd8P29595 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nedd8P29595 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nedd8P29595 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nedd8P29595 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nedd8P29595 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nedd8P29595 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nedd8P29595 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.23□□□□□ -0.29
Nedd8P29595 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nedd8P29595 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nedd8P29595 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.22□□□□□ -0.29
Nedd8P29595 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.22□□□□□ -0.29
Nedd8P29595 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nedd8P29595 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.22□□□□□ -0.29
Nedd8P29595 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nedd8P29595 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.22□□□□□ -0.29
Nedd8P29595 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nedd8P29595 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.22□□□□□ -0.29
Nedd8P29595 Gm13312-201ENSMUST00000119631 718 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms