Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Pde6bP23440 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.67■□□□□ 0.1
Pde6bP23440 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Pde6bP23440 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pde6bP23440 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.66■□□□□ 0.1
Pde6bP23440 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 Gm8749-201ENSMUST00000117737 331 ntBASIC15.66■□□□□ 0.1
Pde6bP23440 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.66■□□□□ 0.1
Pde6bP23440 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.66■□□□□ 0.1
Pde6bP23440 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 Gm27631-201ENSMUST00000184163 466 ntBASIC15.66■□□□□ 0.1
Pde6bP23440 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pde6bP23440 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pde6bP23440 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.66■□□□□ 0.1
Pde6bP23440 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.66■□□□□ 0.1
Pde6bP23440 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Pde6bP23440 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6bP23440 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pde6bP23440 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pde6bP23440 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.65■□□□□ 0.1
Pde6bP23440 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.65■□□□□ 0.1
Pde6bP23440 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Gm29667-201ENSMUST00000190817 490 ntBASIC15.65■□□□□ 0.1
Pde6bP23440 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.65■□□□□ 0.1
Pde6bP23440 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.65■□□□□ 0.1
Pde6bP23440 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pde6bP23440 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pde6bP23440 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6bP23440 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Pde6bP23440 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Pde6bP23440 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6bP23440 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6bP23440 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6bP23440 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6bP23440 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6bP23440 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6bP23440 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Pde6bP23440 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6bP23440 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6bP23440 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6bP23440 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.64■□□□□ 0.09
Pde6bP23440 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6bP23440 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6bP23440 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Pde6bP23440 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6bP23440 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.64■□□□□ 0.09
Pde6bP23440 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6bP23440 Gm3436-201ENSMUST00000179930 840 ntBASIC15.64■□□□□ 0.09
Pde6bP23440 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6bP23440 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.64■□□□□ 0.09
Pde6bP23440 Gm6218-201ENSMUST00000219812 628 ntBASIC15.64■□□□□ 0.09
Pde6bP23440 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.64■□□□□ 0.09
Pde6bP23440 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6bP23440 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms