Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LtaP09225 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.72□□□□□ -0.53
LtaP09225 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LtaP09225 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LtaP09225 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
LtaP09225 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
LtaP09225 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LtaP09225 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.72□□□□□ -0.53
LtaP09225 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
LtaP09225 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LtaP09225 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LtaP09225 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LtaP09225 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LtaP09225 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
LtaP09225 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.71□□□□□ -0.53
LtaP09225 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LtaP09225 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LtaP09225 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LtaP09225 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
LtaP09225 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LtaP09225 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LtaP09225 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LtaP09225 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LtaP09225 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LtaP09225 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LtaP09225 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
LtaP09225 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
LtaP09225 Gm6222-201ENSMUST00000120787 396 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.71□□□□□ -0.53
LtaP09225 Gm9719-201ENSMUST00000162765 543 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.71□□□□□ -0.53
LtaP09225 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
LtaP09225 Gm29310-201ENSMUST00000185468 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm21825-201ENSMUST00000185728 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm29109-201ENSMUST00000185895 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm21896-201ENSMUST00000186520 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm21873-201ENSMUST00000186728 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm21794-201ENSMUST00000187056 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm21880-201ENSMUST00000187275 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.71□□□□□ -0.53
LtaP09225 Gm21826-201ENSMUST00000187451 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm21198-201ENSMUST00000188393 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm21749-201ENSMUST00000189343 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm21901-201ENSMUST00000189568 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm29424-201ENSMUST00000189716 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm28599-201ENSMUST00000189838 694 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm21867-201ENSMUST00000189917 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm29269-201ENSMUST00000190087 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm21722-201ENSMUST00000190153 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm28423-201ENSMUST00000190701 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm21899-201ENSMUST00000190745 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm21910-201ENSMUST00000191163 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm21849-201ENSMUST00000191571 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm28678-201ENSMUST00000191593 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm20910-201ENSMUST00000193268 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Gm21871-201ENSMUST00000194621 696 ntBASIC11.71□□□□□ -0.53
LtaP09225 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LtaP09225 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.71□□□□□ -0.53
LtaP09225 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LtaP09225 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LtaP09225 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LtaP09225 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
LtaP09225 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
LtaP09225 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LtaP09225 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LtaP09225 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LtaP09225 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
LtaP09225 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LtaP09225 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LtaP09225 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.71□□□□□ -0.54
LtaP09225 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
LtaP09225 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LtaP09225 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
LtaP09225 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LtaP09225 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LtaP09225 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
LtaP09225 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
LtaP09225 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LtaP09225 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LtaP09225 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LtaP09225 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
LtaP09225 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LtaP09225 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LtaP09225 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LtaP09225 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LtaP09225 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LtaP09225 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LtaP09225 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
LtaP09225 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LtaP09225 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LtaP09225 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LtaP09225 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LtaP09225 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LtaP09225 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LtaP09225 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.7□□□□□ -0.54
LtaP09225 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.7□□□□□ -0.54
LtaP09225 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
LtaP09225 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LtaP09225 Gm25144-201ENSMUST00000179561 110 ntBASIC11.7□□□□□ -0.54
LtaP09225 Gm25352-201ENSMUST00000179815 110 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms