Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.23□□□□□ -0.13
Hoxb3P09026 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC14.23□□□□□ -0.13
Hoxb3P09026 Gm46209-201ENSMUST00000217912 553 ntBASIC14.23□□□□□ -0.13
Hoxb3P09026 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.23□□□□□ -0.13
Hoxb3P09026 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.22□□□□□ -0.13
Hoxb3P09026 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hoxb3P09026 Snord83b-201ENSMUST00000104546 94 ntBASIC14.22□□□□□ -0.13
Hoxb3P09026 Mir877-201ENSMUST00000104738 85 ntBASIC14.22□□□□□ -0.13
Hoxb3P09026 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.22□□□□□ -0.13
Hoxb3P09026 Gm25116-201ENSMUST00000157191 122 ntBASIC14.22□□□□□ -0.13
Hoxb3P09026 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.22□□□□□ -0.13
Hoxb3P09026 Gm6407-201ENSMUST00000176468 549 ntBASIC14.22□□□□□ -0.13
Hoxb3P09026 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.22□□□□□ -0.13
Hoxb3P09026 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.22□□□□□ -0.13
Hoxb3P09026 Gm45453-201ENSMUST00000211758 853 ntBASIC14.22□□□□□ -0.13
Hoxb3P09026 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.22□□□□□ -0.13
Hoxb3P09026 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Hoxb3P09026 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hoxb3P09026 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.22□□□□□ -0.13
Hoxb3P09026 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hoxb3P09026 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hoxb3P09026 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb3P09026 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hoxb3P09026 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.21□□□□□ -0.13
Hoxb3P09026 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Hoxb3P09026 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.21□□□□□ -0.13
Hoxb3P09026 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.21□□□□□ -0.13
Hoxb3P09026 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.21□□□□□ -0.13
Hoxb3P09026 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC14.21□□□□□ -0.13
Hoxb3P09026 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.21□□□□□ -0.13
Hoxb3P09026 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hoxb3P09026 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hoxb3P09026 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxb3P09026 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms