Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
ApoeP08226 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
ApoeP08226 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.57□□□□□ -0.24
ApoeP08226 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
ApoeP08226 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.57□□□□□ -0.24
ApoeP08226 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.57□□□□□ -0.24
ApoeP08226 Gm9182-201ENSMUST00000217829 639 ntBASIC13.57□□□□□ -0.24
ApoeP08226 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.57□□□□□ -0.24
ApoeP08226 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
ApoeP08226 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.57□□□□□ -0.24
ApoeP08226 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.57□□□□□ -0.24
ApoeP08226 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ApoeP08226 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ApoeP08226 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.56□□□□□ -0.24
ApoeP08226 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.56□□□□□ -0.24
ApoeP08226 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.56□□□□□ -0.24
ApoeP08226 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.56□□□□□ -0.24
ApoeP08226 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
ApoeP08226 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.56□□□□□ -0.24
ApoeP08226 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ApoeP08226 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.56□□□□□ -0.24
ApoeP08226 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ApoeP08226 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
ApoeP08226 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.56□□□□□ -0.24
ApoeP08226 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ApoeP08226 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.56□□□□□ -0.24
ApoeP08226 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.55□□□□□ -0.24
ApoeP08226 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.55□□□□□ -0.24
ApoeP08226 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ApoeP08226 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ApoeP08226 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.55□□□□□ -0.24
ApoeP08226 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms